Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu11g01113 ATGGAAGCCATTTCTTCTAAGCATCTTCTCACAACTCTTTTCGTAATTATGGCTTGTAGTTTCACCACACACTGTGCCAACAAAGGCATTGAAAGACCATACCAAGAAACTAACACAGTGTTCATCAGAACATCTTGTAGTTCCACAACCTATCCAAGACTCTGCTATAGCTCCTTAGTGAAGCATGCAGAGTTTATCCAAACAAACCGTGTGCTTTTAACAGGAACAGCACTTAACGTGACTCTTGCATCTGTGAAATCGACCTCAGCAGTGATGTCAATGATGGCAAAGAGGCAGGGGCTGAAGCCGAGAGAGGTTGCAGCGATGAAGGACTGTGTGGAGGAGCTGAGTGACTCGGTGGATGAACTGAGAAGGTCTATCGATGGGCTGAATCATCTGAGAACCTCCAATTTTGAGATGACAATGAGTGACGTACAAACATGGGTGAGTGCTGCTTTGACGGATGAGAGCACTTGCACAGATGGATTCGAAGAGAGTGGCATGAGTGAGGATGGTAGAAACAGAAGGAGCAGTGCCCGAGGACTAGTTGTGCAGGTAGCCCAATTGACCAGCAATGCCTTGGCTTTGATAAATCAGCTGGCAAATCAGGGTTAA 615 0.4618 MEAISSKHLLTTLFVIMACSFTTHCANKGIERPYQETNTVFIRTSCSSTTYPRLCYSSLVKHAEFIQTNRVLLTGTALNVTLASVKSTSAVMSMMAKRQGLKPREVAAMKDCVEELSDSVDELRRSIDGLNHLRTSNFEMTMSDVQTWVSAALTDESTCTDGFEESGMSEDGRNRRSSARGLVVQVAQLTSNALALINQLANQG* 205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu11g01113 204 Coils Coil 113 133 - -
Lapu11g01113 204 PANTHER PECTINESTERASE INHIBITOR-LIKE 11 196 - -
Lapu11g01113 204 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 19 - -
Lapu11g01113 204 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 41 201 IPR035513 -
Lapu11g01113 204 CDD PMEI-like_3 44 202 - -
Lapu11g01113 204 Gene3D Invertase/pectin methylesterase inhibitor family protein 37 202 IPR035513 -
Lapu11g01113 204 FunFam Pectinesterase inhibitor 3 37 201 - -
Lapu11g01113 204 Pfam Plant invertase/pectin methylesterase inhibitor 41 196 IPR006501 GO:0004857
Lapu11g01113 204 SMART PMEI_2 37 196 IPR006501 GO:0004857
Lapu11g01113 204 NCBIfam pectinesterase inhibitor domain 8 200 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu11g01113 Lapu-Chr11 13236503 13238222 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu11g01113 37 200 Carbohydrate Esterase AT1G53830 34.337 6.35e-24 96.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu11g01113 - - vra:106755267 314.309
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu11g01113 11 13236503 13238222 Lapu11g01113 11 13236503 13238222 ECH