Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu11g01112 ATGGAGGCCATATCTTCCAAGCACCTTATCACGTCCCTTTTCATAATTATTGCTTCTAGTTTCACCGCACACAGTGCCAACAAAGTTAGTGAAAGACCATACCAAGAAGCGAGCACAGTGTTCATCAGAACATCTTGTAGTTCCACAACATATCCAAGACTCTGCTACAGCTCCCTAGTAAAGCATGCAGACTTGATCCAAACAAACCGCGAGGTGTTAACAGGTACAGCCCTGAATGTGACTCTTGCATCAGCGAAATCGACATCAGCAATGATGTCGACACTGGGAAAGAGGCAGGGGCTGAAGCCAAGAGAGGTTGCAGCGATGAAAGACTGTGTGGAGGAGCTGAGTGACTCAGTGGATGAACTGAGAAGGTCTATCGAAGAGATGAGTCACCTAAGAGCCTCCAACTTTGAGATGACAATGAGTGACGTACAAACATGGGTGAGTGCTGCTTTGACGGATGAGAGCACGTGCACTGATGGCTTCCAAGAGACTGCGACTGGTGCTACAAATATCAAGAGCAGTGTGAGAGGGCAAATTGTGCAGGTAGCCCAATTGACCAGCAATGCATTGGCTTTGATAAATCAGCTATCCAATTCTCATGGTTAA 612 0.4673 MEAISSKHLITSLFIIIASSFTAHSANKVSERPYQEASTVFIRTSCSSTTYPRLCYSSLVKHADLIQTNREVLTGTALNVTLASAKSTSAMMSTLGKRQGLKPREVAAMKDCVEELSDSVDELRRSIEEMSHLRASNFEMTMSDVQTWVSAALTDESTCTDGFQETATGATNIKSSVRGQIVQVAQLTSNALALINQLSNSHG* 204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu11g01112 203 Coils Coil 113 133 - -
Lapu11g01112 203 NCBIfam pectinesterase inhibitor domain 8 198 IPR006501 GO:0004857
Lapu11g01112 203 FunFam Pectin methylesterase inhibitor 1 37 198 - -
Lapu11g01112 203 PANTHER PECTINESTERASE INHIBITOR-LIKE 13 194 - -
Lapu11g01112 203 Pfam Plant invertase/pectin methylesterase inhibitor 41 194 IPR006501 GO:0004857
Lapu11g01112 203 Gene3D Invertase/pectin methylesterase inhibitor family protein 37 200 IPR035513 -
Lapu11g01112 203 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 41 199 IPR035513 -
Lapu11g01112 203 SMART PMEI_2 37 194 IPR006501 GO:0004857
Lapu11g01112 203 CDD PMEI-like_3 44 200 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu11g01112 Lapu-Chr11 13229764 13230375 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu11g01112 25 201 Carbohydrate Esterase AT3G14310 32.597 2.46e-24 97.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu11g01112 - - gmx:100305537 319.701