Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu11g01090 ATGAATAACAATACGTGTTCTGCCTGCATAGCAATTCCAGCCGCGTTGCTGATTTTGCTGGCTCTGTGTGAAGCCACTTCAGGGCTAACACAAGCAGATGCGCTTCTTAGGTGGAAACAAAGTCTGCCTGACCAACCCATTTTGGACTCTTGGGTGATCAACTCCACTGCAACAACTCAAACTCCATGTTCATGGCGAGGTATCACTTGTGATTCCCAAGGCACTGTCACTATAATAAACTTGGCCTATACTGGACTTGCAGGTACCCTTCAAAATTTGAACTTGTCTGTTTTTCCCAACCTTCTTCGTCTTGATCTCAAAGTAAACAACCTCACTGGCCTCATTCCACAAAACATTGGGGTTCTCTCAAACCTCCAATTCCTCGACCTTTCCACCAACTACCTCAATGGCACTCTGCCTCTTTCCATTGCCAATCTGACTCAAGTTTTTGAGCTTGATGTTTCAAGAAATGATATATCAGGGGTGTTAGACCCTCGTTTATTCCCTGATGGATCTGACAGTCCCAAAAGTGGCCTCATTGGTATCCGGAATCTTCTCTTCCAGGACACCCTCCTAGGTGGTAGAATTCCAAATGAAATAGGGAACATAAGAAACTTGACCCGGCTAGCTCTAGATGGAAACAACTTCTATGGGCTTATTCCTCCATCTCTAGGCAACTGCACACATTTAAGCGTCCTTAGAATCCCTCAAAACCAACTCTCTGGCCCAATACCTCCAAGTATAGGTAAATTGACCAATCTAACTGATGTGCGCCTTTTCATCAACAACTTAAATGGTACTGTTCCCCAAGAATTTGGAAACTTGTCTTCCTTGATTGTGCTGCATCTTGCTGAGAATAACTTCGTCGGTGAATTGCCACCAGAAGTGTGCAAAAGTGGCACACTTCTGAATTTCAGTGCAGCCTACAATAGTTTCACTGGTCCAATTCCAAGAAGCCTTAGACAGTGTCCATCCCTGTACAGAGTTCGACTTGAATACAACCAGTTATCAGGTTATGCAGATCAGGATTTTGGAGTGTATCCTAACCTCACTTACATAGACTTCAGCTATAACAAGGTGGAAGGTGGCATTTCTGCAAACTGGGGAGCTTGCAAGAACTTGCAATTTCTCAACATGGCTGGGAATGGAGTAAGTGGTAACATTCCAGGTGAGATTTTTTATTTGGACCAACTACAAGAGCTTGACCTATCCTCCAACCAATTGCTAGGACAGATTCCACCTCAGATAGGAAATTCCTCGAACATGTATAACTTAAATTTAAGTCACAACAAATTCTCTGGTGTGGTACCAGCAGAAATTGGAAAGCTTTCCAGTTTGCGGTCCTTAGATCTGTCCATGAACTTGCTGGTGGGATTAATCCCAAAGCAGACAGGGGACATGTCCGGCTTGCAAAATTTAAATCTAAGCAACAACAAATTTAATGGCACAATCCCCTACCAAATTGGAAATCTTGCAGATTTACAATATTTTTTGGATTTGAGTTACAATTCACTTTCAGGAGATATTCCCAGTGATCTTGGGAGGCTTTCAAAATTGATAAGCTTGAATATCTCTCACAACAATCTGTCAGGTTCTATACCTCACTCCCTAAGTGAAGTGCTGAGTTTGTCAGCTATCGACCTATCCTACAATAATTTGGAGGGTCCAGTTCCTAATGCTGGCATATTCAACTCTTCTTATCCCCTGGATTTGAGCAACAACAAAGATCTTTGTGGGCGTATTCGAGGTTTGCGTCCTTGTAATGTCTCTCTCACTAAGCCTGACGGAGGATCAAGTAAAAGAAGCAAGGCAGTGATCCCTATTGTAGCTTCTCTGGGAGGTGCTCTTTTTATTTCTTTGGTGTTAGTTGGGATTTATTTCTTTAGCTACAAGAGAAAATCAAGAGCTCCAAGACAAAGAAATTCGTTCAGTAGAACGAATCCATTTTCAATTTGGTACTTCAATGGGAGAGTTGTGTATAGAGACATAATTGAAGCTACGGAGAACTTTGATAGCCAATATTGCATTGGAGAAGGAGCAGTGGGAAAAGTTTATAAAGCGGAGATGTCAGGAGGTCAAGTATTTGCTGTAAAAAAGTTGAAGTGCGATTCAGACAACTTAGACGTTCAGAGAATAAAATCCTTTGAGAATGAGGTGCAAGCCATGACAGAAACACGCCACCGAAACATTGTCAAGCTTTATGGATTTTGCTCTCAAGGGGTGCACACCTTTTTAATTTATGAGTACATGGAAAGTGGAAACTTAGCTAACATGCTGAGAGATGACACTGGAGCATTGCAACTGAATTGGCACAAAAGGGTCGATATTGTCAAAAGTGTAGTAAACGCGTTGTCCTATATGCATCATGATTGTGCTCCACCTTTAATTCACAGAGACATATCAAGCAAGAACATTTTACTCTCCTCCAATCTTTCAGCTCACGTCTCAGATTTTGGAACTGCAAGGTTTCTGAAGCCGGATTCTCCTATTTGGACATCATTTGCGGGCACATATGGTTATGCTGCTCCAGAGCTAGCATACACAATGGCAGTGACTGAAAAATGTGATGTGTTCAGCTTTGGCGTTTTGGCTTTCGAGATTCTTACGGGAAAGCACCCCGGTGAGGTTGTTTCCTACATACAAAGTTGCAGTGAAGAGAAGGTGAAGATGAAAGAGATTTTAGACCCTCGTCTCTTGCCTCCTGCCAAGAAGCATATTTTGAAGCAAGTGGACTTGATTGCCAACATAGCTCTTTCTTGTTTAAAGACAAACCCTCACTCTCGACCAACCATGCGAGACATTGCTCAGCTGCTTGAAATGGAGAGTGCAGACATCATATAA 2841 0.4241 MNNNTCSACIAIPAALLILLALCEATSGLTQADALLRWKQSLPDQPILDSWVINSTATTQTPCSWRGITCDSQGTVTIINLAYTGLAGTLQNLNLSVFPNLLRLDLKVNNLTGLIPQNIGVLSNLQFLDLSTNYLNGTLPLSIANLTQVFELDVSRNDISGVLDPRLFPDGSDSPKSGLIGIRNLLFQDTLLGGRIPNEIGNIRNLTRLALDGNNFYGLIPPSLGNCTHLSVLRIPQNQLSGPIPPSIGKLTNLTDVRLFINNLNGTVPQEFGNLSSLIVLHLAENNFVGELPPEVCKSGTLLNFSAAYNSFTGPIPRSLRQCPSLYRVRLEYNQLSGYADQDFGVYPNLTYIDFSYNKVEGGISANWGACKNLQFLNMAGNGVSGNIPGEIFYLDQLQELDLSSNQLLGQIPPQIGNSSNMYNLNLSHNKFSGVVPAEIGKLSSLRSLDLSMNLLVGLIPKQTGDMSGLQNLNLSNNKFNGTIPYQIGNLADLQYFLDLSYNSLSGDIPSDLGRLSKLISLNISHNNLSGSIPHSLSEVLSLSAIDLSYNNLEGPVPNAGIFNSSYPLDLSNNKDLCGRIRGLRPCNVSLTKPDGGSSKRSKAVIPIVASLGGALFISLVLVGIYFFSYKRKSRAPRQRNSFSRTNPFSIWYFNGRVVYRDIIEATENFDSQYCIGEGAVGKVYKAEMSGGQVFAVKKLKCDSDNLDVQRIKSFENEVQAMTETRHRNIVKLYGFCSQGVHTFLIYEYMESGNLANMLRDDTGALQLNWHKRVDIVKSVVNALSYMHHDCAPPLIHRDISSKNILLSSNLSAHVSDFGTARFLKPDSPIWTSFAGTYGYAAPELAYTMAVTEKCDVFSFGVLAFEILTGKHPGEVVSYIQSCSEEKVKMKEILDPRLLPPAKKHILKQVDLIANIALSCLKTNPHSRPTMRDIAQLLEMESADII* 947
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu11g01090 946 FunFam Leucine-rich repeat receptor-like protein kinase TDR 272 589 - -
Lapu11g01090 946 FunFam MDIS1-interacting receptor like kinase 2 750 944 - -
Lapu11g01090 946 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 177 268 - -
Lapu11g01090 946 ProSitePatterns Tyrosine protein kinases specific active-site signature. 795 807 IPR008266 GO:0004672|GO:0006468
Lapu11g01090 946 SUPERFAMILY Protein kinase-like (PK-like) 643 940 IPR011009 -
Lapu11g01090 946 PRINTS Leucine-rich repeat signature 125 138 - -
Lapu11g01090 946 PRINTS Leucine-rich repeat signature 395 408 - -
Lapu11g01090 946 FunFam Nuclear pore complex protein NUP107 29 168 - -
Lapu11g01090 946 Gene3D Phosphorylase Kinase; domain 1 632 749 - -
Lapu11g01090 946 PANTHER LEUCINE RICH REPEAT KINASE 2 224 941 - -
Lapu11g01090 946 ProSiteProfiles Protein kinase domain profile. 670 940 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu11g01090 946 SMART LRR_typ_2 443 466 IPR003591 -
Lapu11g01090 946 SMART LRR_typ_2 203 227 IPR003591 -
Lapu11g01090 946 SMART LRR_typ_2 516 540 IPR003591 -
Lapu11g01090 946 SMART LRR_typ_2 467 491 IPR003591 -
Lapu11g01090 946 SMART LRR_typ_2 122 145 IPR003591 -
Lapu11g01090 946 SMART LRR_typ_2 146 170 IPR003591 -
Lapu11g01090 946 SMART LRR_typ_2 275 299 IPR003591 -
Lapu11g01090 946 SMART LRR_typ_2 395 419 IPR003591 -
Lapu11g01090 946 Pfam Leucine rich repeat 397 456 IPR001611 GO:0005515
Lapu11g01090 946 Gene3D Transferase(Phosphotransferase) domain 1 750 944 - -
Lapu11g01090 946 FunFam Leucine-rich repeat receptor protein kinase MSP1 632 749 - -
Lapu11g01090 946 Pfam Leucine Rich Repeat 518 538 IPR001611 GO:0005515
Lapu11g01090 946 SUPERFAMILY L domain-like 54 388 - -
Lapu11g01090 946 Gene3D Ribonuclease Inhibitor 29 175 IPR032675 -
Lapu11g01090 946 Pfam Protein kinase domain 675 936 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu11g01090 946 SUPERFAMILY L domain-like 344 579 - -
Lapu11g01090 946 Gene3D Ribonuclease Inhibitor 177 302 IPR032675 -
Lapu11g01090 946 Gene3D Ribonuclease Inhibitor 303 593 IPR032675 -
Lapu11g01090 946 Pfam Leucine rich repeat N-terminal domain 30 71 IPR013210 -
Lapu11g01090 946 SMART serkin_6 670 943 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu11g01090 Lapu-Chr11 13036861 13045928 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu11g01090 8 843 Receptor kinase-like Gene Family AT4G08850 38.486 0.0 605
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Lapu11g01090 Pkinase 1.4e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu11g01090 - - var:108339503 1650.18