Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu11g01089 ATGACCAACCATACATGTTGTGTCTGCATTACAAAGGCAATCCCAGCTACGCTGCTGCTTTTTCTGGCTCTTTGTGGAGCCACTTATGGGCTAACTCAAGCTGAGGCTCTTGTCAAGTGGAAACAAAGTCTACCTGACCAACCCATTTTGGACTCTTGGGTGATCAACTCCACTGCAACAACTCAAACTCCATGTTCATGGCGAGGTATCACTTGTGATTCCCAAGGCACTGTCACTATAATAAACTTGGCCTATACTGGACTTGCAGGTACCCTTCAAAATTTGAATTTGTCTGTTTTTCCCAACCTTCTTCGTCTTGATCTCAAAGTAAACAACCTCACTGGCCTCATACCACAAAACATTGGGGTTCTCTCAAACCTCCAATTCCTCGACCTCTCCACCAACTACCTCAATGGCACTCTGCCTCTTTCCATTGCCAATCTGACTCATGTTTTTGAGCTTGATGTTTCAAGAAATGATATATCTGGGGTGTTAGACCCTCGTCTATTCCCTGATGGATCTGACAGTCCCAAAAGTGGCCTCATTGGCATCAGGAACCTCCTCTTCCAGGACACCTTGCTAGGTGGCAGAGTCCCAAATGAAATAGGGAACATTAGAAACTTGACTCTGCTAGCTCTAGATGGAAACAACTTCGATGGCCCTATTCCCCCATCTCTGGGCAACTGCACACATTTAAGCATTCTTAGAATGCCTCAAAACCAACTCTCAGGCACAATACCTCCAAGTATTGGTAAATTAACCAATCTAACCGATGTGCGCTTTTTCACCAACAACTTAAATGGTACAGTGCCCCAAGAATTTGGAAACTTGTCTTCCTTGATTGTGCTGCATCTTGCTGAGAACAACTTTGTTGGTGAATTACCACCGGAAGTGTGCAAAAGCGGCAAACTTGTAAATTTCAGTGCAGCCTTTAATAGTTTCACTGGCCCAATTCCAAGAAGCCTTAGAAACTGTCCATCCTTGTACAGGGTTCGACTTGAATACAACCGGCTGACAGGTTTTGCGGATCAGGATTTTGGAGTGTATTCTAACCTCACTTACATGGACTTCAGCCATAACAGGGTGGAAGGTGACCTCACTGCAAATTGGGGTGCCTGCAGAAACTTGCAATATCTCAACATGGCTGGGAATGGAATAAGTGGCAACATACCAAGTGAGATTTTTCAGTTGGACCAACTAGAAGAGCTTGACCTATCCTCCAACCAAATATCAGGAGAGATTCCTCCACAGATAGGAAACTCCAACTTGTATGAATTAAATTTGAGTGAAAACAAACTCTCTGGTATGGTACCAGTAGAAATTGGAAAGCTTTCCAATTTGCGATCCTTGGACCTCTCTTTGAACAGGCTACTGGGACCAATCCCCAGTCAGATAGGGGACATCTCCAACCTGCAGAATTTAAATCTGAGCAACAATAACTTTAACGGCTCAATCCCCTACCAAGTTGGAAACCTTGCATCTTTACAAGATTTTTTGGACTTGAGTTACAATGCACTTACAGGAGAGATTCCTCCTGATCTTGGGAAGCTTTCAAATTTGGTAAGCTTGAATATCTCTCACAACAATCTGTCAGGTCCAATCCCTGACTCCCTTAGTAAAATGGTGAGTTTGTCAGCCATCAACCTCTCCAACAACAATTTAGATGGTCCAGTTCCTGAAGGTGGTATATTCAACTCTTCTCATCCCGTAGATTTGAGCAACAACAAAAATTTATGTGGGAATATTCGAGGTTTGCAACCTTGTAATCTCTCTCTCACTGATGGAGGTGGATCAAGTAACAAAAAGAAGGTTGTGATCCCAATAGTTGCATCCTTGGGAGGTGCTCTTATTATTTCATTGGTGTGTGTTGGGATTGTTTCTTTGTGCTGCAAGAGAAAGTCAAGTGCTCGAAGACAAAAAAGTTCAATAAAAAAACTAAATCCATTTTCCATTTGGTACTTCAATGGCAGAGTTGTGTACGGAGACATAATTGAAGCTACAAATAACTTTGACAACCAGTATTGCATTGGGGAAGGAGCATTGGGAAAAGTTTATAAAGCAGAGATGAAAGGTCAAGTATATGCCGTAAAAAAATTGAAGTGTGATGCAGAAAACTTAGACGTTGAGAGTATAAAAACCTTTCAGAATGAGGTAGAAGCCATGTCAGAAACACGCCACCGAAACATTGTCAAGCTTTACGGATTTTGTTCTGAAGGGATGTATACATTTTTAATTTATGAGTATATGAATAGAGGGAACTTAGCTGACATGCTGAGAAATGACAAGGATGCACTAGAACTAGATTGGCCTAAGAGGGTTGACATTGTGAAAGGTGTAGCAAGCGCTTTGTCCTATATGCATCATGATTGTGCTCCACCTTTAATTCACAGAGACATATCAAGCAAGAACATTTTACTCTCCTCCAATCTTTCAGCTCACGTCTCAGATTTTGGAACTGCAAGGTTTCTGAAGCCGGATTCTCCTATTTGGACATCATTTGCGGGCACATATGGTTATGCTGCTCCAGAGCTTGCTTACACAATGGCAGTGACTGAGAAATGTGATGTGTTCAGCTTTGGAGTTTTGGCTTTCGAGGTTCTTACGGGAAAGCACCCCGGTGACCTTGTTTCCTATATACAAACTTCTAGTGAACAGAAAATAAACTTCAAAGAGATTTTAGACCCTCGTCTCTTGCCTCCTTCCAAGAACAATATTTTGAAGGAATTGGCATTGATTGCCAACCTTGGTCTTTCATGTTTACAAACCAATGCTCAGTCTCGACCAACCATGCGATACATAGCTCAACTCCTTGAAATGGATACGTGCTGA 2829 0.4224 MTNHTCCVCITKAIPATLLLFLALCGATYGLTQAEALVKWKQSLPDQPILDSWVINSTATTQTPCSWRGITCDSQGTVTIINLAYTGLAGTLQNLNLSVFPNLLRLDLKVNNLTGLIPQNIGVLSNLQFLDLSTNYLNGTLPLSIANLTHVFELDVSRNDISGVLDPRLFPDGSDSPKSGLIGIRNLLFQDTLLGGRVPNEIGNIRNLTLLALDGNNFDGPIPPSLGNCTHLSILRMPQNQLSGTIPPSIGKLTNLTDVRFFTNNLNGTVPQEFGNLSSLIVLHLAENNFVGELPPEVCKSGKLVNFSAAFNSFTGPIPRSLRNCPSLYRVRLEYNRLTGFADQDFGVYSNLTYMDFSHNRVEGDLTANWGACRNLQYLNMAGNGISGNIPSEIFQLDQLEELDLSSNQISGEIPPQIGNSNLYELNLSENKLSGMVPVEIGKLSNLRSLDLSLNRLLGPIPSQIGDISNLQNLNLSNNNFNGSIPYQVGNLASLQDFLDLSYNALTGEIPPDLGKLSNLVSLNISHNNLSGPIPDSLSKMVSLSAINLSNNNLDGPVPEGGIFNSSHPVDLSNNKNLCGNIRGLQPCNLSLTDGGGSSNKKKVVIPIVASLGGALIISLVCVGIVSLCCKRKSSARRQKSSIKKLNPFSIWYFNGRVVYGDIIEATNNFDNQYCIGEGALGKVYKAEMKGQVYAVKKLKCDAENLDVESIKTFQNEVEAMSETRHRNIVKLYGFCSEGMYTFLIYEYMNRGNLADMLRNDKDALELDWPKRVDIVKGVASALSYMHHDCAPPLIHRDISSKNILLSSNLSAHVSDFGTARFLKPDSPIWTSFAGTYGYAAPELAYTMAVTEKCDVFSFGVLAFEVLTGKHPGDLVSYIQTSSEQKINFKEILDPRLLPPSKNNILKELALIANLGLSCLQTNAQSRPTMRYIAQLLEMDTC* 943
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu11g01089 942 Gene3D Ribonuclease Inhibitor 111 172 IPR032675 -
Lapu11g01089 942 Gene3D Phosphorylase Kinase; domain 1 630 748 - -
Lapu11g01089 942 Pfam Leucine rich repeat N-terminal domain 32 73 IPR013210 -
Lapu11g01089 942 SMART LRR_typ_2 277 301 IPR003591 -
Lapu11g01089 942 SMART LRR_typ_2 124 147 IPR003591 -
Lapu11g01089 942 SMART LRR_typ_2 148 172 IPR003591 -
Lapu11g01089 942 SMART LRR_typ_2 517 541 IPR003591 -
Lapu11g01089 942 SMART LRR_typ_2 397 421 IPR003591 -
Lapu11g01089 942 SMART LRR_typ_2 444 467 IPR003591 -
Lapu11g01089 942 SMART LRR_typ_2 468 492 IPR003591 -
Lapu11g01089 942 FunFam Nuclear pore complex protein NUP107 31 170 - -
Lapu11g01089 942 FunFam Leucine-rich repeat receptor-like protein kinase TDR 274 590 - -
Lapu11g01089 942 PANTHER LEUCINE RICH REPEAT KINASE 2 95 247 - -
Lapu11g01089 942 Gene3D Ribonuclease Inhibitor 29 110 IPR032675 -
Lapu11g01089 942 SMART serkin_6 670 937 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu11g01089 942 SUPERFAMILY Protein kinase-like (PK-like) 644 938 IPR011009 -
Lapu11g01089 942 Gene3D Ribonuclease Inhibitor 174 262 IPR032675 -
Lapu11g01089 942 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 179 270 - -
Lapu11g01089 942 Gene3D Transferase(Phosphotransferase) domain 1 749 941 - -
Lapu11g01089 942 PRINTS Leucine-rich repeat signature 444 457 - -
Lapu11g01089 942 PRINTS Leucine-rich repeat signature 400 413 - -
Lapu11g01089 942 SUPERFAMILY RNI-like 263 560 - -
Lapu11g01089 942 Gene3D Ribonuclease Inhibitor 263 590 IPR032675 -
Lapu11g01089 942 ProSiteProfiles Leucine-rich repeat profile. 399 421 IPR001611 GO:0005515
Lapu11g01089 942 SUPERFAMILY L domain-like 53 361 - -
Lapu11g01089 942 ProSitePatterns Tyrosine protein kinases specific active-site signature. 794 806 IPR008266 GO:0004672|GO:0006468
Lapu11g01089 942 Pfam Protein kinase domain 675 934 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu11g01089 942 Pfam Leucine rich repeat 499 554 IPR001611 GO:0005515
Lapu11g01089 942 ProSiteProfiles Protein kinase domain profile. 670 939 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu11g01089 942 FunFam Leucine-rich repeat receptor protein kinase MSP1 632 748 - -
Lapu11g01089 942 FunFam MDIS1-interacting receptor like kinase 2 749 942 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu11g01089 Lapu-Chr11 13036861 13045928 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu11g01089 31 842 Receptor kinase-like Gene Family AT4G08850 39.868 0.0 615
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Lapu11g01089 Pkinase 1.9e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu11g01089 - - gmx:100814345 1582