Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu11g01073 ATGGGCAAAACAAGCAGTTATTGCGTCCTTCTTCTATCCCTTCTCACTTTTTCATTCTTTGTGGCTGAAACCTATGCAAATAGGCAACTTCAAGCTCTTGACAAACTGCACAAGTCCAAGTTTTTCGGAGGAAATTCACAAACTGATAGGAGTGAGTTTGAGGTAGAGGAGGTTGTTCTTGATGGCATTGTTCATTCTCAAGAGGGTCTCAAAGAGAAAGATAGAATTGGAAGGCTTCCAGGACAACCCCCAGTGAGTTTTTCTCAGTATGGAGGGTATGTCACTGTGGATAAATTTGCTGGTCGTGCCTTCTATTATTACTTTGTTGAAGCTCAACGTACTAAACACACACTCCCTCTTCTTCTTTGGCTCAATGGAGGTCCTGGATGTTCATCTCTTGCCTATGGAGCAATGCAAGAACTTGGACCTTTCAGAGTAAACAGTGATGGCAAAACATTACACCTGAATATATTTTCATGGAACAAAGTTGCCAATGTTTTATTCCTGGAGTCACCTGCTGGAGTAGGATTTTCCTATTCAAACAAATCAACAGATTATGCAACCAATGGAGATAAGAAAACAGCTGCAGATAATTATTTGTTCTTGTTGAATTGGTTGGAGAGGTTTCCTGAGTATAAAAACAGAGATTTCTTCATTGCTGGAGAGAGCTATGCTGGGCATTATGTGCCTCAACTTGCACACACCATTCTTTATCATAACAAAAGGGCAAATAAAGCAATCATCAACCTCAAAGGAATCTTGATTGGGAATGCAGTGATCAATGAAGAAACTGACTCGCCAGGACTGTTTGATTATCTTGCTAGCCATGCAATCATCTCAGACAGAGCTGCTTATCTCAACAAAGCTTGTGAATCCTCATCAAAGATTGAGAAAAGTGAGTGCGATGCAGCAGCAGAAGAAGTTGAGAATGATATTGAATACATTGATTTATACAATATTTATGCTCCACTGTGCAACAGTCCCAAGCTCACACCCTTGCCAAAAAGATATTCTATGGTCACTGATCCATGTAGTGAATATTATGTGCATGCATATATGAATAGAAAAGATGTTCAAGAGGCTCTCCATGCCAATGTCACCAATCTCAAACATGACTGGGAACCCTGCAGCGACGTCATTACTAAGTGGGTAGATGCTGCTTCAACAGTCCTTCCACTTTTACACGAATTTCTCAACAATGGCCTCAGGGTTTGGATTTTCAGTGGTGACACGGATGGAAGGGTGCCTATTACTTCAACCAAATATTCGGTTAAGAAGATGGAGCTTCCCATTGAAACTGTTTGGCACCCTTGGTTTTCTCATGGAGAGGTTGGTGGCTACGCAGAAGTCTATAAAGGAGGCCTAACATTAGCTACAGTGAGGGGAGCAGGGCATCAAGTACCAAGTTACCAACCCGCAAGGGCCCTAACTTTGATCAAATATTTCTTAGACGGCACTCCTCTTCCCGGTCCTCCCAAAAGAAATGCTTAG 1491 0.4185 MGKTSSYCVLLLSLLTFSFFVAETYANRQLQALDKLHKSKFFGGNSQTDRSEFEVEEVVLDGIVHSQEGLKEKDRIGRLPGQPPVSFSQYGGYVTVDKFAGRAFYYYFVEAQRTKHTLPLLLWLNGGPGCSSLAYGAMQELGPFRVNSDGKTLHLNIFSWNKVANVLFLESPAGVGFSYSNKSTDYATNGDKKTAADNYLFLLNWLERFPEYKNRDFFIAGESYAGHYVPQLAHTILYHNKRANKAIINLKGILIGNAVINEETDSPGLFDYLASHAIISDRAAYLNKACESSSKIEKSECDAAAEEVENDIEYIDLYNIYAPLCNSPKLTPLPKRYSMVTDPCSEYYVHAYMNRKDVQEALHANVTNLKHDWEPCSDVITKWVDAASTVLPLLHEFLNNGLRVWIFSGDTDGRVPITSTKYSVKKMELPIETVWHPWFSHGEVGGYAEVYKGGLTLATVRGAGHQVPSYQPARALTLIKYFLDGTPLPGPPKRNA* 497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu11g01073 496 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 77 472 IPR001563 GO:0004185|GO:0006508
Lapu11g01073 496 FunFam Carboxypeptidase 70 327 - -
Lapu11g01073 496 FunFam Carboxypeptidase 390 485 - -
Lapu11g01073 496 ProSitePatterns Serine carboxypeptidases, histidine active site. 455 472 IPR033124 GO:0004185
Lapu11g01073 496 ProSitePatterns Serine carboxypeptidases, serine active site. 219 226 IPR018202 GO:0004185
Lapu11g01073 496 Gene3D - 344 381 - -
Lapu11g01073 496 Gene3D - 390 485 - -
Lapu11g01073 496 PRINTS Carboxypeptidase C serine protease (S10) family signature 169 179 IPR001563 GO:0004185|GO:0006508
Lapu11g01073 496 PRINTS Carboxypeptidase C serine protease (S10) family signature 455 468 IPR001563 GO:0004185|GO:0006508
Lapu11g01073 496 PRINTS Carboxypeptidase C serine protease (S10) family signature 156 168 IPR001563 GO:0004185|GO:0006508
Lapu11g01073 496 PRINTS Carboxypeptidase C serine protease (S10) family signature 205 230 IPR001563 GO:0004185|GO:0006508
Lapu11g01073 496 Pfam Serine carboxypeptidase 80 484 IPR001563 GO:0004185|GO:0006508
Lapu11g01073 496 Gene3D alpha/beta hydrolase 70 327 IPR029058 -
Lapu11g01073 496 SUPERFAMILY alpha/beta-Hydrolases 68 490 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu11g01073 Lapu-Chr11 12924440 12930475 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu11g01073 352 488 Calmodulin-binding Proteins AT2G22960 29.927 1.31e-15 73.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu11g01073 K16297 - gmx:100783864 857.44