Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu11g01059 ATGAAGAGATTGAGGTCGAGCGATGATCTTCACTCGTACGGCGGCGACAAGAACAGCAATGGTTGCAAGGATTCCAGTAATCTGAACCGTTCGTTCTCGTCGGCGCAGCGGAGTTTCTATTACAAACCCGATAATGCGCGCAAGGGTTTGGTCTCGTCTTCGTCGTCCCGGTACGAGAGGGATCGGGCGGTTGAGGAGGACCGGGAAGGTTCGAGGGTGGTTCGGAAGCGATCTGAGCATGATTTCGAGGGATTTGATCGGAGGAAAGGGTTCGATCGGTACAGAGAGAGTGATCGGAGTTTGATGCACCGGTCGGAGAGTTTCTGCAGCGGTGGGTCGCGGAGGGATCAGTTTCCGAAGGGGTTTCGGTCGGAGAGGGAGCGGTCGCGGAGGGAGGGGAGTGTGTCGTCTTGGCGTAGAGGGTTGAAGGATTTGGATGAAAGGGAGAGGGTGGTGCGTTCGCCCAAGGGTTTGAGGGATGTGAAGTCTCCGTCTTGGTCCAAGGATTCTGTTTCGGAAAGCGAGCAATCTAAGAAGAGATCTTCTTCTCCCAGACCCTTCAGAGAGGGTAACTCCAACAAGTCTAAGTCCAAGTCTCCCACTTGGTCTAAGGACTCTGTTTCGGAGAGCGAGCAGTCCAAGAGTGTTGAGGTGAAGAAAGCTGAAGAGGAGTTGTTGCAGCAGGTTCAGAGTGGGAGTAGTAGTGAGATGGAAGAAGGGGAGCTTGAACCTGAACCCCAAACGGAAGTGGTTCCTCCTGCGAGTGAAGAGTTGCCCCCCTCTGTTACTTTGGAGACTGATGAGAAGCAAGTTCAGAAGAATGAATGCCACCCCAATGATGATGACACTGATGCTACCATGGATGAGAGACAGGAGTTATCGACTAAGGAAGAGGTGAAACCTAATGAGGAGGTTGGTTGCGAGGTTAAGGATGCAGAGAAAGAGGCTGATAAGATGCCGGATGTTCAGGAGGATCCGACTGAGAAAATGGCTGTTACCGAGACTGAACTTGGTTCTGTGGGGAATGGCAATGACGATAAAAGAGAGGAGGGTTTGGATGCCGGGGCTGAGTGTGAGGAGGAAACAAAGAAAGGTGCGGATGTGGAGAAGGAGGTGGTGTTGAATGAAGATGAGACTAAAGAGGACAAGGGTGTAGATCTCGGAACCAGCGTGGATGTTGTCAAACCTGAGTTAAATGATAGAGTATCAACAGAAAATGAAGTCCCCAAGGAAGTGGATAGAGAAGTGGTGATGGAGAGTGTGGTCAACAGTGTTAAGGATAAGGGGAAAGGAATTTCTGTTGCACTCGCACCTCTTACTGATGTTGCTCACTCTTCGGATGATGGCTTGTGGATGGACAGAGGGTCAATGGACCTCCCAACGTGTTCTGTTGATGTTATAGAAGGTCCAAGCACAAGGGGATTTGAGTTGTTCTCCAGATCTCCTGTTAGGAAAGTGGAGAAAGTGGACCACACGGTTCTCAACAACCACAAGGATGACTTGGAGCAGCTTGATCTTACTCTTAGCTTGCCGAATGTTTTGTTACCTATTGGTGCTCATGAGACAGGAGCTCATGAAACAACATCACAAGCCCCTGGATCCCCCAGTCAAGCACGGAGTGTGCAGTCTTTAAGTAATACATTTTGCACCAACTCTGATGGTTTTCCTGCATCGATGTCCCTTTCAGGTTCCCAATCATTCTATCACAATCCAAGCTGTTCTTTGACAAAAAACTCAGTGGACTATGAACAATCTGTTGGCAGTCGTCCTTTGTTCCAGGGAATAGATCAAGTTTCCCAGGGATGTTGGCAAGGTCAGTCTCAGAGTGATCCCAAACAGAAAGAAGTTCCTTTTGGTCAAAGAACCTCGGTGAATGGAAATGGCTCCCTTTTCCAGTCTCAGGCATCATGGGGTGTTTTAGACAGTCATGCTGTGAAGGGTCAACATTCCAGAGTTCTAGAAGGAAGTTCAAAAATTGCCGGTGGACTTGACAGGCAATTGAGTTTTCACAAGCAGTTTTCAGGGCAGTCAAGACGCCATGACGATGTTAGATCTCCGCCACAGAGTGTTGGGTCTCATGATATTGGATCAAATTATAGCTTTGAGAAAAAGAGGGAGGTTAGAGACAGGGGTAGTGGTAGTCTGTATCGAACTGCCAGCCAGAAGGAACAGGAACAACTTATGATGGGTGGAGCTGATTTTGTTGAGACAATTATTGCAAGAATTGTTTCTGAACCTGTTCATGCAATGTCCCGAAAGTTTCATGAAATGACCGGACAGGCCATAGCATGTCTGAAAGAGGGTATTCGCGAAATCCTGCTCAACGCTGATAAGCACGGGCAGATACTTGCTTTCCAAAAAGTTCTTCAGAACAGGTCTGATGTAATCTTGGATGTTCTATTGAAGTGCCACCGAGTGCAACTGGAAATTTTGGTTGCTTTAAAAACTGGTTTAACTCATTTCCTTCATGTAGATAGCAGCATTTCATCTTCTGAGTTGGCTCAAATTTTTCTGAACTTAAGGTGTAAGAATCTTTCATGTCGAAGTCAGTTACCTGTGGATGAATGTGATTGCAAGGTTTGTGCACAGAAGAATGGTTTTTGTAGGGAATGTATGTGCCTTGTGTGTTCTAAGTTTGACAATGCCTCAAATACGTGTAGCTGGGTTGGATGTGATGTTTGCCTTCACTGGTGCCATACTGACTGTGGATTACGGGAATCTTATATTAGAAATGGGCATGGGACAAAAGGGATGACTGAAATGCAGTTTCACTGTATTGCTTGTGACCATCCTTCTGAGATGTTTGGCTTTGTCAAGGAGGTGTTTCACAATTTTGCAAAAGAATGGTCTGTTGAGGCCCTTTGCAAAGAGCTTGAGTATGTAAAGAGGATTTTTTCTGCCAGCAAGGATATGAGAGGGAGACAGTTGAATGAAATTGCAGAACACATGCTGCCAAGGTTGGCAAATAAGTCTAATCTTCCTGAGGTTTTGAGGCACATCATGTCTTTCCTTTTGGATGGTGATTCTTCCAAATTAAGCATGACAACAAACTTTCCTGGGAAGGAGCAAATCAAAGAAAACAATGGAGTAGCAGGGCCTAGCCAGGAAGCAGCTTGGATGAAATCTATTTATTCAGAAAAGCCGCCTCTGTTAGAAAGGCCTGCGAATATCCTTCCTACCTTTGATCAGAATGATAAAAGAACTCTTGCGCAAGAATTGCAGATGAGTAGCATCCAGAAGGACTACTGTTTTGACGAATTGGAGAGTGTAGTAAAAATTAAACAGGCGGAGGCTAAAATGTTTCAATCACGTGCTGATGATGCTAGAAGAGAAGCTGAAGGGTTGAAGCGCATTGCCCTTGCAAAGAGTGAGAAAATTGAGGAAGAATATGCCAATCGAGTTGCCAAGTTGCGACTGACTGAGACGGATGAAATTCGTAAACAAAAATTTGAAGAAGCCCAAGCATTAGAGAGGGCACATCTGGAGTATTTGAACATGAAAAGGAGAATGGAGACAGACATTAAAGATCTGTTATCCAAAATGGAAGCTACTAAAATGAGCCTTGCCATGTGA 3573 0.4604 MKRLRSSDDLHSYGGDKNSNGCKDSSNLNRSFSSAQRSFYYKPDNARKGLVSSSSSRYERDRAVEEDREGSRVVRKRSEHDFEGFDRRKGFDRYRESDRSLMHRSESFCSGGSRRDQFPKGFRSERERSRREGSVSSWRRGLKDLDERERVVRSPKGLRDVKSPSWSKDSVSESEQSKKRSSSPRPFREGNSNKSKSKSPTWSKDSVSESEQSKSVEVKKAEEELLQQVQSGSSSEMEEGELEPEPQTEVVPPASEELPPSVTLETDEKQVQKNECHPNDDDTDATMDERQELSTKEEVKPNEEVGCEVKDAEKEADKMPDVQEDPTEKMAVTETELGSVGNGNDDKREEGLDAGAECEEETKKGADVEKEVVLNEDETKEDKGVDLGTSVDVVKPELNDRVSTENEVPKEVDREVVMESVVNSVKDKGKGISVALAPLTDVAHSSDDGLWMDRGSMDLPTCSVDVIEGPSTRGFELFSRSPVRKVEKVDHTVLNNHKDDLEQLDLTLSLPNVLLPIGAHETGAHETTSQAPGSPSQARSVQSLSNTFCTNSDGFPASMSLSGSQSFYHNPSCSLTKNSVDYEQSVGSRPLFQGIDQVSQGCWQGQSQSDPKQKEVPFGQRTSVNGNGSLFQSQASWGVLDSHAVKGQHSRVLEGSSKIAGGLDRQLSFHKQFSGQSRRHDDVRSPPQSVGSHDIGSNYSFEKKREVRDRGSGSLYRTASQKEQEQLMMGGADFVETIIARIVSEPVHAMSRKFHEMTGQAIACLKEGIREILLNADKHGQILAFQKVLQNRSDVILDVLLKCHRVQLEILVALKTGLTHFLHVDSSISSSELAQIFLNLRCKNLSCRSQLPVDECDCKVCAQKNGFCRECMCLVCSKFDNASNTCSWVGCDVCLHWCHTDCGLRESYIRNGHGTKGMTEMQFHCIACDHPSEMFGFVKEVFHNFAKEWSVEALCKELEYVKRIFSASKDMRGRQLNEIAEHMLPRLANKSNLPEVLRHIMSFLLDGDSSKLSMTTNFPGKEQIKENNGVAGPSQEAAWMKSIYSEKPPLLERPANILPTFDQNDKRTLAQELQMSSIQKDYCFDELESVVKIKQAEAKMFQSRADDARREAEGLKRIALAKSEKIEEEYANRVAKLRLTETDEIRKQKFEEAQALERAHLEYLNMKRRMETDIKDLLSKMEATKMSLAM* 1191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu11g01059 1190 MobiDBLite consensus disorder prediction 672 715 - -
Lapu11g01059 1190 Pfam PHD - plant homeodomain finger protein 842 962 IPR032881 -
Lapu11g01059 1190 MobiDBLite consensus disorder prediction 210 224 - -
Lapu11g01059 1190 MobiDBLite consensus disorder prediction 1 29 - -
Lapu11g01059 1190 MobiDBLite consensus disorder prediction 698 712 - -
Lapu11g01059 1190 MobiDBLite consensus disorder prediction 102 384 - -
Lapu11g01059 1190 MobiDBLite consensus disorder prediction 118 157 - -
Lapu11g01059 1190 MobiDBLite consensus disorder prediction 268 331 - -
Lapu11g01059 1190 MobiDBLite consensus disorder prediction 43 79 - -
Lapu11g01059 1190 CDD PHD_OBE1_like 872 928 IPR047578 -
Lapu11g01059 1190 Coils Coil 1091 1118 - -
Lapu11g01059 1190 MobiDBLite consensus disorder prediction 341 384 - -
Lapu11g01059 1190 PANTHER VERNALIZATION-INSENSITIVE PROTEIN 3 1 1187 IPR004082 -
Lapu11g01059 1190 Pfam Coiled-coil region of Oberon 1062 1178 IPR032535 -
Lapu11g01059 1190 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 1124 1146 IPR004082 -
Lapu11g01059 1190 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 792 807 IPR004082 -
Lapu11g01059 1190 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 807 822 IPR004082 -
Lapu11g01059 1190 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 1085 1105 IPR004082 -
Lapu11g01059 1190 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 833 854 IPR004082 -
Lapu11g01059 1190 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 949 968 IPR004082 -
Lapu11g01059 1190 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 753 775 IPR004082 -
Lapu11g01059 1190 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 879 899 IPR004082 -
Lapu11g01059 1190 MobiDBLite consensus disorder prediction 186 209 - -
Lapu11g01059 1190 MobiDBLite consensus disorder prediction 54 79 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu11g01059 Lapu-Chr11 12838213 12844408 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu11g01059 842 987 PHD Gene Family AT5G57380 27.397 2.37e-13 72.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu11g01059 - - gmx:100817003 2003.79