Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu11g01055 ATGGAGTACCTCTACCTTTCTTGCAGAGCCGAATCCGCCGTCTCCACCTCCAATTCGGTGTCTTCTTCCAAACCAACCAAAGAAAAAGATAAAGAGAAAGAGAAAAGCAGCATCAAGATCCAGGAGTTTCAGTACAGTGACCTCGAAGCCGCCACCAATGGCTTCTCCGACCGCAAGCTCCTCGGCAAAGGGAGCCACGGTTATGTCTACAAGGCGATGGTTCGCGGCCGTCCCGTGGCGGTGAAGCGTCCGTCGCGGCCTCATCATCACGGCGTAGTTCCCCGACCCGTGTCTTCTTCCGCGCCGCTCGAGATCACCAACGAGGTGGACAACGAGATCGACATCTTGTCCAAAATCCAGAGCCCCAGGCTTGTGAATTTGGTGGGTTTCACGAACGATTCAAGAGACAGGCTTTTGGTGGTGGAGTTCATGAGCAATGGCACCCTTTACGATGTTCTTCATTCCTCTCCAAGGCCTCCCAATTGGGGTAGGAGGATTCGTCTGGCTCTGCAAACTGCGAAAGCCATTGACACTCTTCACTCCTCGACTCCTCCTGTGATTCACCGTGACATAAAGTCTGCCAACGTTCTCATCGACCGCAGCTACAATGCGAGGTTAGGTGATTTTGGTTTGGCTTTAAGAGGCCATGTTGATGACTACAGACTCAGGTCCACTCCCCCTGCTGGCACCATGGGCTATCTTGACCCTTGTTATGTCACTCCCGATAATTTGAGCACTAAAACTGATGTTTTCAGCTTTGGGATTTTGTTGTTGGAGATTATAAGTGGAAGGAAGGCCATTGATATCACTTATTCACCACCTTCTATCGTGGATTGGGCCATTCCTCTCATTAAGAAAGGGAAGTTGTTGGCTGTTTATGATCCTAGAATTGCACCTCCTAAGGATCCGGTTGTGAGGAAGCAGTTGGCTGTGATTGCTGCCAAGTGTGTGAGGTCTTGTAGGGAGAGGAGACCCTCCATGAAGGAGGTTGTTACTTGGCTTTGTGGGCTGTGTAAACTGGTGCCTCTTCATTCGTGGAATGGTTTTAACAACCCTTGCATGATGGTTGAGACTGTGGGGCGCCCCGTTGAAGCAAGGAATGGTCAATTCAGTTCTAGGCTGGCAGGTGTGGAGGAGGGGAATTTTGATGCTTTGGATGCCAGGCTGTCCAAGTCTGCAATGAGGTATTCTCGGAGGGTGTATTCTGATTTGGGGTTCAGCAGCAACTTGATGGACTTGATGGCTACCACTGAGGAGCCTGAATTTCTGAGAGATGCTGATGGGGTGGAGCATAGTTCTAAATCGGCTGAACAGGTTCCTAGCTCCAGGTTTGGCAGTGGAAGATATTCCATAAGAGGGAGGAACCTATACCGGCCATGTGGCAGTGACAAGGACGCGTTTGGCTTGAGTAAAGTCCAGATTGTAGAAATGATCTCTTCATTTTTAGTAGGTTTTTTGATTGAAGGGCGCATTACTGATGTCCCCTTAACGTTTGTTCAAAAAAGCTTTGCCAAAGGTTTTGTTTCCTCCTCATAA 1536 0.4935 MEYLYLSCRAESAVSTSNSVSSSKPTKEKDKEKEKSSIKIQEFQYSDLEAATNGFSDRKLLGKGSHGYVYKAMVRGRPVAVKRPSRPHHHGVVPRPVSSSAPLEITNEVDNEIDILSKIQSPRLVNLVGFTNDSRDRLLVVEFMSNGTLYDVLHSSPRPPNWGRRIRLALQTAKAIDTLHSSTPPVIHRDIKSANVLIDRSYNARLGDFGLALRGHVDDYRLRSTPPAGTMGYLDPCYVTPDNLSTKTDVFSFGILLLEIISGRKAIDITYSPPSIVDWAIPLIKKGKLLAVYDPRIAPPKDPVVRKQLAVIAAKCVRSCRERRPSMKEVVTWLCGLCKLVPLHSWNGFNNPCMMVETVGRPVEARNGQFSSRLAGVEEGNFDALDARLSKSAMRYSRRVYSDLGFSSNLMDLMATTEEPEFLRDADGVEHSSKSAEQVPSSRFGSGRYSIRGRNLYRPCGSDKDAFGLSKVQIVEMISSFLVGFLIEGRITDVPLTFVQKSFAKGFVSSS* 512
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu11g01055 511 FunFam Serine/threonine-protein kinase-like protein 144 347 - -
Lapu11g01055 511 MobiDBLite consensus disorder prediction 15 36 - -
Lapu11g01055 511 ProSitePatterns Serine/Threonine protein kinases active-site signature. 186 198 IPR008271 GO:0004672|GO:0006468
Lapu11g01055 511 Pfam Protein tyrosine and serine/threonine kinase 59 332 IPR001245 GO:0004672|GO:0006468
Lapu11g01055 511 Gene3D Phosphorylase Kinase; domain 1 25 143 - -
Lapu11g01055 511 SMART serkin_6 55 334 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu11g01055 511 ProSiteProfiles Protein kinase domain profile. 55 347 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu11g01055 511 SUPERFAMILY Protein kinase-like (PK-like) 36 334 IPR011009 -
Lapu11g01055 511 Gene3D Transferase(Phosphotransferase) domain 1 144 342 - -
Lapu11g01055 511 PANTHER OS01G0253100 PROTEIN 16 336 - -
Lapu11g01055 511 ProSitePatterns Protein kinases ATP-binding region signature. 61 82 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu11g01055 Lapu-Chr11 12811723 12813901 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu11g01055 4 334 Receptor kinase-like Gene Family AT3G59420 41.449 3.33e-75 253
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CR4L Lapu11g01055 PK_Tyr_Ser-Thr 1.4e-35 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu11g01055 - - vum:124832395 888.641