Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu11g01046 ATGGAAGAGAGATGCGCGCTGTGCCAGACCAGGGCGGCGATGCTGTGCGAGTCGGACGAGGCAAAGCTATGCTGGGAGTGCGACGAGAAAGTTCACAGCGCCAATTTCTTGGTGGCCAAGCATTGGCGTGTGCTTCTGTGTCGTTTTTGCTACTCCCCCACTCCCTGGAAAGCCTCCGGCACCAACCTCACACCCACCCTCTCCTTTTGTACACCTTGTCTCGCCGATCGACAAGCCCGCTTGCACCGGCTCATCAATAATCTTCGTCAACGGCGTGGTGTTCGTCGTAAAGAAGGGGACGATGAAGCGCTTCCACTCTCCTCCGCTTCTGCCACGTCACCACCCACTGCTCCCGCCTTACCATTCAACCCACTAACTAATAGCTCTTCCATGGATTCCCATGATGAGGCAGCGTGTTCTTCGTCGGAGATGCTTGACGCTACATTGGGCGGTAAGGATGAATGA 465 0.5591 MEERCALCQTRAAMLCESDEAKLCWECDEKVHSANFLVAKHWRVLLCRFCYSPTPWKASGTNLTPTLSFCTPCLADRQARLHRLINNLRQRRGVRRKEGDDEALPLSSASATSPPTAPALPFNPLTNSSSMDSHDEAACSSSEMLDATLGGKDE* 155
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu11g01046 154 MobiDBLite consensus disorder prediction 90 154 - -
Lapu11g01046 154 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 4 122 - -
Lapu11g01046 154 Pfam B-box zinc finger 3 41 IPR000315 GO:0008270
Lapu11g01046 154 SMART bboxneu5 1 46 IPR000315 GO:0008270
Lapu11g01046 154 MobiDBLite consensus disorder prediction 106 137 - -
Lapu11g01046 154 CDD Bbox1_BBX-like 5 46 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu11g01046 Lapu-Chr11 12736928 12737462 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu11g01046 2 78 C2C2-CO-like Transcription Factor Family AT5G54470 62.338 1.53e-29 105
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Lapu11g01046 zf-B_box 2e-05 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu11g01046 - - gmx:100818267 165.236