Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu11g01043 ATGGCCAAGAAGAAGAGCTGGTTTAGTCTGGTGAAGAGGCTCTTTTTAAGGGACACACATCCCACACAAGATAAGAAGGAGAAAAGAAGGAAATGGATATTTGGAAGGCTGAAGAGCAAGAGATTACCTTCAATTACAGCTCCACTTCCATCTAAAGAGACGACACTAAGCGAAGCAGAGGAAGAACAAAGCAAACATGCTTTAACAGTGGCCATTGCCTCAGCAGCTGCTGCTGAAGCTGCTGTTACTGCAGCACATGCTGCTGCAGAGGTTGTTCGCCTCACTGGGGTCTCACAATCTGCCCTTCAATGCAGAGAAAGGTCAGAAGAATCTCAACCTCTCAAAACTAGTAATGCTGCTCCTCAAATCACATACCAGTGCAAGAGGGACAAAAAAGAATCTGCTGCAGTCATCAAAATTCAAACTGCATTTAGGGCTTACCTGGCAAGGAAGGCTTTGAGGGCATTGAAGGGAATAGTTAAACTTCAAGCTATCATTCGTGGCAGAGCAGTAAGACGCCAAGCTATGAGTACTCTTAAGTGCTTGCAGTCCATTGTGAGCATCCAATCACAGGTCTGTGCAAGGAGGCTCCAAATGGTAGAAGGGAGATGTGACTACGCTGAAAATGAAGAGATGCAAGATTCTAAAGACAAGATAATTAGGATGGACTCAAACAGTGAAAGGAAGTGTGATGAGAGCACTCCATTGAAGGAAGAGTTAGACACCTCTTGCATAAGCATGAAAGAAACAGTTCTCAAGAGAGAAAGAATAAAAGAATACTCATTTAACCATAGAAGGTCAGCAGAGTCAGAAAGAAGTAAAGTAAGTGGAAGATGGAGATACTGGCTAGAGCAGTGGGTAGATACACAGCTTTCAAAGAGTAAAGAACTTGAAGATTTAGACTCAGTTTTTAGTTCACATTCTAGGGGCGGGGAGGAATATGGAAGCAGACAACTTAAGGTGAGAAGTATTAACAGGCAAAATCCAGTTGAAGGATTGGATTCTCCGGTAATTGGTTCAAGAAGATCTTTTCCTCATAGGAGGCAGTGCTCGGTGGGAGAAGACCAGTCATTTTCAAGCTCTCCTGCAACTCCAGCATACATGGCTGCAACAGAATCAGCAAAAGCAAAAGCAAGATCAACAAGCTCACCAAAAATAAGGACAGGGGGGAACGTGGACACGAACTCTGATAGCTATTCACCATGCAAGAAAAAGCTATCCATTTCATCTTCTATTAACAGTGAAGTACTTAGTGGTGGTAGGATGGCCAAGCTCAGTGGTAACCAGCAAAGATCTCCAAGTTTTAAGGGCCTTTCAGTGCCTATAAAATCAAGCCGAACTATCAAGGATCTCAGCATTAATTCAGATTGCTCACTGCCTAATTGGGGTCCTCAAGGTTCCTTCAAATGA 1410 0.434 MAKKKSWFSLVKRLFLRDTHPTQDKKEKRRKWIFGRLKSKRLPSITAPLPSKETTLSEAEEEQSKHALTVAIASAAAAEAAVTAAHAAAEVVRLTGVSQSALQCRERSEESQPLKTSNAAPQITYQCKRDKKESAAVIKIQTAFRAYLARKALRALKGIVKLQAIIRGRAVRRQAMSTLKCLQSIVSIQSQVCARRLQMVEGRCDYAENEEMQDSKDKIIRMDSNSERKCDESTPLKEELDTSCISMKETVLKRERIKEYSFNHRRSAESERSKVSGRWRYWLEQWVDTQLSKSKELEDLDSVFSSHSRGGEEYGSRQLKVRSINRQNPVEGLDSPVIGSRRSFPHRRQCSVGEDQSFSSSPATPAYMAATESAKAKARSTSSPKIRTGGNVDTNSDSYSPCKKKLSISSSINSEVLSGGRMAKLSGNQQRSPSFKGLSVPIKSSRTIKDLSINSDCSLPNWGPQGSFK* 470
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu11g01043 469 MobiDBLite consensus disorder prediction 325 403 - -
Lapu11g01043 469 MobiDBLite consensus disorder prediction 350 367 - -
Lapu11g01043 469 Gene3D - 129 184 - -
Lapu11g01043 469 Pfam IQ calmodulin-binding motif 135 154 IPR000048 GO:0005515
Lapu11g01043 469 ProSiteProfiles IQ motif profile. 157 184 IPR000048 GO:0005515
Lapu11g01043 469 MobiDBLite consensus disorder prediction 375 403 - -
Lapu11g01043 469 PANTHER IQ-DOMAIN 5-RELATED 1 410 - -
Lapu11g01043 469 SMART iq_5 132 154 IPR000048 GO:0005515
Lapu11g01043 469 Pfam Protein of unknown function (DUF4005) 354 435 IPR025064 -
Lapu11g01043 469 ProSiteProfiles IQ motif profile. 133 161 IPR000048 GO:0005515
Lapu11g01043 469 MobiDBLite consensus disorder prediction 420 440 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu11g01043 Lapu-Chr11 12713658 12717326 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu11g01043 1 469 IQD Protein Family AT5G13460 45.825 1.97e-110 332
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu11g01043 - - gmx:100800192 746.117