Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu11g01042 ATGGCAGAAATTGTAGTTTCCTTTGTTTTAGATCACTTATCCCAGCTTGTGGCACGCGAAGCTAACTTGCTGTTTGGCGTGGAGGACAGGATCCAGTCCCTCCAGAATGAGCTTCAAATCATCAACAACCTCCTCAATACCTCAAAGACCAAGAAGGGAATTGAAAATACAGCGCTAAACCAAATCAGAGATGTGGCCCACGTAGCTGAGGATGTCATCGACACATTTGTAACCAAAGTTTCCATTCACAAGAGGAGAACCATGCTGGGGAGGATGCTTCGTGGCTTTGGCCAAGCAAGGTTGATTCACGACGTAGCCAACAAAATAGACACGATCAAAACCACTCTCAACGAAATACGCGACAACAAGATCAAATATGATGCTTTCATAGAAAGCAATAATCAATCCTCTGCACAAGAGGAGCGAAGGGCTCAATCTCTCCACGAGCTAAGAATGTTAGAAAAGAGAAATGTGGTAGAAGATGTGGTTGGATTTGTGGATGACTCCAAGGTGGTCATCAAGCGGCTCCTTGAAGGTGGTTCAAATCGTAACGCTGTGTCAATCATTGGCATGGGGGGCCTGGGCAAGACCACCCTTGCCCGAAAGGTCTATAACAGCAGCCAGGTGAAGAACCACTTCGCGTGTTGCGCGTGGGTTTATGTGTCAAACGAGTGCAGAGTTAAGGAGCTTTTGCTTGGCCTTGTCAAGCATTTGAGGCCAAATAATGAACACAAATCCAGAGGCAACAAGAAAGGTAAGAAAAACGCTCGAGACAGTAGTAGCTTGAGTGAGGAGGAGCTGAAGAAACTGGTGCGGAACTGCTTGGAGGGGGAAAGGTATCTCGTGGTCGTAGATGACCTGTGGAAAAGGCAAGATTGGGACGAGGTGCAAGATGCTTTCCCGGACAACAACAGAGGCAGCAGATTATTGATCACCAGTCGTTTGAAGGAGGTGGCTTTGCATACTAGCCATGATCTTCCTTACTATCTTCAATTCCTCAATGAAGAAGAAAGTTGGGAGTTGTTTAGCAGGAAGGTGTTTAGGGGTGAAGACTGCCCTTCTGATTTGGAGGCTCTAGGCAAGCTGATGGTTCAAAGTTGTCGTGGTTTGCCGCTCTCCATCATTGTCTTAGCAGGGCTGCTAGCCAACAAGGAAAAGTCACACAGAGAATGGTCAAAAGTGGTGGGTCATGTTAATTGGTATCTTACTCAAAATGAGACCCAAGTGAAGGACATAGTGCTCAAACTCAGCTACGACAACTTGCCGAGCAGATTGAAACCATGTTTTCTCTATCTTGGGATATTTCCTGAAGACTTTGAAATCCCTGTTAGGCCATTATTGCAAAAATGGGTTGCCGAGGGTTTTATACAAGATACAGGAAATAGAGACCCAGATGACGTTGCGGAAGACTACTTGTACGAGCTCGTTGATCGTAGTTTGGTCCAAGTAGCAGGATTGAAGACTAATGGAAGTGTGAAGACGTGTCAGATACATGATCTTCTTCGAGATCTTTGCATATCAGAGAGCAGAGAGAACAAAGTTTTTGAAGTTTGCACAGATAATAACATTCTAATCCCGACAAAACCTCGCAGACTTTTCATTCACAGTAGCATGGGTCACTACATTTCTTCAAGCAACAATGACCATTCATGTATCCGTTCCCTGATCTTCTTTGGCCCAAATTACTATGTTCGTGGGAGGCAATGGAAATGGCTTTTGGAAGATTTCAGATTGGTTCGAGTATTAGAGCCTGGAGCATTCAGCTGGGTAGAAAAGATCCCTTCTAATTTAGGGAACTTTATCCACTTAAGGTATTTGAGAATAGACTTAAACAATGTTACATTTATTCCAGCATCAATACTT 1863 0.4444 MAEIVVSFVLDHLSQLVAREANLLFGVEDRIQSLQNELQIINNLLNTSKTKKGIENTALNQIRDVAHVAEDVIDTFVTKVSIHKRRTMLGRMLRGFGQARLIHDVANKIDTIKTTLNEIRDNKIKYDAFIESNNQSSAQEERRAQSLHELRMLEKRNVVEDVVGFVDDSKVVIKRLLEGGSNRNAVSIIGMGGLGKTTLARKVYNSSQVKNHFACCAWVYVSNECRVKELLLGLVKHLRPNNEHKSRGNKKGKKNARDSSSLSEEELKKLVRNCLEGERYLVVVDDLWKRQDWDEVQDAFPDNNRGSRLLITSRLKEVALHTSHDLPYYLQFLNEEESWELFSRKVFRGEDCPSDLEALGKLMVQSCRGLPLSIIVLAGLLANKEKSHREWSKVVGHVNWYLTQNETQVKDIVLKLSYDNLPSRLKPCFLYLGIFPEDFEIPVRPLLQKWVAEGFIQDTGNRDPDDVAEDYLYELVDRSLVQVAGLKTNGSVKTCQIHDLLRDLCISESRENKVFEVCTDNNILIPTKPRRLFIHSSMGHYISSSNNDHSCIRSLIFFGPNYYVRGRQWKWLLEDFRLVRVLEPGAFSWVEKIPSNLGNFIHLRYLRIDLNNVTFIPASIL 621
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu11g01042 621 CDD RX-CC_like 2 121 IPR038005 -
Lapu11g01042 621 Gene3D - 5 117 - -
Lapu11g01042 621 Coils Coil 24 51 - -
Lapu11g01042 621 Gene3D - 144 326 IPR027417 -
Lapu11g01042 621 Pfam Rx N-terminal domain 5 85 IPR041118 -
Lapu11g01042 621 Gene3D - 418 508 IPR036388 -
Lapu11g01042 621 FunFam Probable disease resistance protein At5g66910 332 419 - -
Lapu11g01042 621 FunFam Probable disease resistance protein At1g61300 144 327 - -
Lapu11g01042 621 Gene3D - 332 417 IPR042197 -
Lapu11g01042 621 Pfam NB-ARC domain 171 419 IPR002182 GO:0043531
Lapu11g01042 621 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 158 432 IPR027417 -
Lapu11g01042 621 PANTHER DISEASE RESISTANCE PROTEIN RP 32 617 IPR044974 GO:0006952
Lapu11g01042 621 FunFam Probable disease resistance protein At1g63360 418 507 - -
Lapu11g01042 621 MobiDBLite consensus disorder prediction 241 261 - -
Lapu11g01042 621 PRINTS Disease resistance protein signature 185 200 - -
Lapu11g01042 621 PRINTS Disease resistance protein signature 367 381 - -
Lapu11g01042 621 PRINTS Disease resistance protein signature 274 288 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu11g01042 Lapu-Chr11 12698167 12708002 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu11g01042 185 435 WRKY Transcription Factor Family AT5G45050 25.591 4.38e-06 48.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu11g01042 - - vun:114168352 954.125