Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu11g01038 ATGAACTGGGATGAAGAGGGCATACGCATAATCAATCTTCTTAACGAGTGTGCTACTTTTACTGAATCAGGAAACTTCATTGGTGCAGATATTGCACTGTACCATCTCTCTCAACTTGCTTCCCCAGATGGTGATTCAATGCAACGTGTTGCCACTTATTTCACTGAGGCACTAGCATGTTGCCAAGTGGCCAAAAACTTGCGTGGTGTACCTAAAGTTCTCCGTTTGGTGAGAACATTATCAACTCATGAACAACAACTTGTCAAGCAACTATTCTTTGATTTCTACCCCTTCTTAAAGATCGCACACACGATCACAAATCAGACCATTATTGAAGCCATGCAAGGGGAAACAGCTATTAATGTGCTTGATCTCAGTCCATCTAATGCTGATCAGTGGACTAATCTCATGCGGGGGTTGAGAGAGCGTTTAACAAACACACCATATCTGAAGATTACTGTCACAGCCATACATGAGAAGAAGGAAGTGTTAGAACAGATGGAGTTGCATCTGAAAATTGAAGCTGAAAGGTTGCACTTCCAATTCCAATTCAATCCTGTTGTGAGCAGTTTGGAGAACCTTGACCCAGAGACATTGCCTATCAAGAAAGGTGAGCCGCTTGCAATTAGCTGTGTGCTTCAGCTTCACTCTCTTCTGGCTGCCAATGATGATGAGATGGTCAAAATGAGGGTTCAAAGGGTTTTTGCTGAGATGCTTACACAACAGAAGAATAAGAAGAAGGTGGATCCAAGTCCTGACTCAGCACTCTCACCTTTTTCTCCATGTCCATCGCATAAGATGGAGTGTTTTCTCAATGGTCTGTGGAGGCTCCAACCCAAAGTGATGGTGATCACTGAGCAAGAATCAAATGTTAATGGGCCCAGTTTGACAGAGAGGGTGTACAAAGCTTTGAACTTTTACAGTACACTGTTTGATTGCTTAGAAGCCTCCACTTCCAGAAGATTAGTAGGGAGAAGCCTATTGGAGAAGATGCTACTTGGTGAAGAGATAAAGAACATTGTTTCATGTGAAGGGGTTGAGAGAAAGGAGAGGCATGAGAAACTTGAAACATGGATCCCAAGGCTTGAATTGGCTGGATTTAGAAGGGCAGCTATCAGCTCCAATGGCATTTGGTTGGCAACAAAGTTGTTACAAAGCTATGTACCAGGATACCACATCCATCACAAGAACAAGTGCTTGTTTATTTGTTGGGACAAAATTCCTCTCTTTTCAGTTTCAGCATGGAAGTTTTAG 1254 0.4266 MNWDEEGIRIINLLNECATFTESGNFIGADIALYHLSQLASPDGDSMQRVATYFTEALACCQVAKNLRGVPKVLRLVRTLSTHEQQLVKQLFFDFYPFLKIAHTITNQTIIEAMQGETAINVLDLSPSNADQWTNLMRGLRERLTNTPYLKITVTAIHEKKEVLEQMELHLKIEAERLHFQFQFNPVVSSLENLDPETLPIKKGEPLAISCVLQLHSLLAANDDEMVKMRVQRVFAEMLTQQKNKKKVDPSPDSALSPFSPCPSHKMECFLNGLWRLQPKVMVITEQESNVNGPSLTERVYKALNFYSTLFDCLEASTSRRLVGRSLLEKMLLGEEIKNIVSCEGVERKERHEKLETWIPRLELAGFRRAAISSNGIWLATKLLQSYVPGYHIHHKNKCLFICWDKIPLFSVSAWKF* 418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu11g01038 417 Pfam GRAS domain family 11 416 IPR005202 -
Lapu11g01038 417 ProSiteProfiles GRAS family profile. 1 416 IPR005202 -
Lapu11g01038 417 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 9 412 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu11g01038 Lapu-Chr11 12661367 12662740 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu11g01038 4 416 GRAS Transcription Factor Family AT1G50420 44.598 3.53e-116 346
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Lapu11g01038 GRAS 1.6e-98 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu11g01038 - - vra:106778126 705.286
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu11g01038 11 12661367 12662740 Lapu11g01038 11 12661367 12662740 ECH