Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu11g01036 ATGGTTCCATCTTCTGTCATTGTTAATTCCCGTTTTCATGAATCGGTTACCTGCTATGCATTTCGCTCCTATCTCTCTGAGTTTATCTCCACTTTCTTCTACGTTTTTCTTGTTGTTGGCTCTGGAATGTCCTCACAAATGACAGGGAAGTTGATGCCTGATGCTTCACTGAACCCAACAAGTTTGGTTGTGGTAGCCATTGCAAGTACTTTTGCTTTGTCTTGTGTTCTGTATATTGCATGGGACATATCAGGTGGACACGTCAATCCGGCAGTGACCTTTGCAATGGCAGTGGGAGGTCACGTTAGTGTACCAACTGCTCTCTTTTATTGGGTCGCTCAACTTATAGCCTCTGTTATGGCTTGCCTTGTTCTAAGGGTCATTGTTGTTGGGATGCACGTTCCAACCTACACCATTGCAGAAGAGATGACAGGGTTTGGAGCATCAGTGTTAGAGGGTATTCTGACATTTCTTTTGGTGTTCACAGTGTATGCAGCCAGGGACCCTAGGCGCAGTCCAATGGGTTCCACAGGCATACTTGTAGTTGGCTTTGTGGCTGGGGCAGGTGCGTTGGCCGCAGGTCCATTCTCTGGTGGGTCAATGAACCCTGCATGTGCTTTTGGCTCGGCAACCATTGCAGGCTCTTTCAGGAACCAAGCAGTGTATTGGGTTGGACCCTTGATTGGTGCCACCATAGGTGGTCTTCTTTATGACAATGTGCTGTTCCGTTCTCTGCCTCCTACAGGGCTTTCAGAAGGAATGGGTGTGTGA 771 0.4786 MVPSSVIVNSRFHESVTCYAFRSYLSEFISTFFYVFLVVGSGMSSQMTGKLMPDASLNPTSLVVVAIASTFALSCVLYIAWDISGGHVNPAVTFAMAVGGHVSVPTALFYWVAQLIASVMACLVLRVIVVGMHVPTYTIAEEMTGFGASVLEGILTFLLVFTVYAARDPRRSPMGSTGILVVGFVAGAGALAAGPFSGGSMNPACAFGSATIAGSFRNQAVYWVGPLIGATIGGLLYDNVLFRSLPPTGLSEGMGV* 257
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Lapu11g01036 256 PANTHER AQUAPORIN-8 12 242 IPR034294 -
Lapu11g01036 256 FunFam Probable aquaporin TIP5-1 6 248 - -
Lapu11g01036 256 Pfam Major intrinsic protein 19 237 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lapu11g01036 256 PRINTS Major intrinsic protein family signature 22 41 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lapu11g01036 256 PRINTS Major intrinsic protein family signature 106 125 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lapu11g01036 256 PRINTS Major intrinsic protein family signature 220 240 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lapu11g01036 256 PRINTS Major intrinsic protein family signature 69 93 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lapu11g01036 256 PRINTS Major intrinsic protein family signature 183 205 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lapu11g01036 256 PRINTS Major intrinsic protein family signature 151 169 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lapu11g01036 256 ProSitePatterns MIP family signature. 87 95 IPR022357 -
Lapu11g01036 256 Gene3D Glycerol uptake facilitator protein. 5 246 IPR023271 -
Lapu11g01036 256 SUPERFAMILY Aquaporin-like 13 245 IPR023271 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Lapu11g01036 Lapu-Chr11 12653312 12655221 Transposed
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu11g01036 1 253 Major Intrinsic Protein MIP AT3G47440 59.684 2.13e-99 289
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu11g01036 K09873 - gmx:100801448 408.683
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu11g01036 11 12653312 12655221 Lapu11g01036 11 12653312 12655221 ECH