Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu11g01018 ATGGCACCTTCTCGGAGTGTTACCGATTCGATGCCTCCGACAACAGCGCCAGAAGTCGAAGAGAAAGATCTTCGGCCGTTCTTTGTTCTTCATAAAGCTTCATCCCGGAGAAGAGATAGAACACCAACTGCACAGGCAAAATTGTGCAAGAGAAATGAGTTATCTTCGTCACCACAAAATCCAAAGAATCTGGTAGGAAGTATGACGGAGGAATGTGATTTCCATTTGTTTCAGCAACTGCAGATTGAAACTTTTGACATTGTTTGGGCAAAGATTGAATCTACCATTAAGGATGTTTTAAGAGATCTCAATGCCAGTGTATTTGATGATATACAACAATGGGTTCTGAAGTGCTTCAACGCTACGAAGTTGCTCGGAGAACACACTATTGCTGAAGCAACTCGGTCTTTTCCTGTTCTAAATAATACTACTCCTGGACAGCTGTTCACTGCTTTCGTTGTCACCAGAAACATAGAGTTCGTTGATGATATATTGACCTTTGAAGAGCTTGGCCATTTCTTGAAATCCCATGGATGCCATGTGGCTAAGCTTTCATCACTGGAGTTTTCACTGAAAAATGGGATTGCTGGTTGCTTGAAAGCTCTATTGCGAGAGTTTCTAGGATGTGCTATTGATTCAGCTGATATATCAATCTTAGCATCATGGTATAGAGAACAAGTAAACTATAATAAACCACTGGTGCTGATCATTAATGATTTAGGGAGATGTTCTGGATCAGTCTTAACTGATTTTATCTTGATGTTGAGTGAATGGATTGTCAAGGTGCCAATTATCTTCGTATTTGGAGTTGCAACAACGGTGGATACTCCAAGAAACATTCTTCCATCACACGCTCTTGAGCGTTTGTGTCCCTCTAGTTTTATGCTTGGAACACCAGCCGAGAGAATGGATGCAATTGTTGAGGCTGTTCTTGTGAAACATTGCACCATGTTTAGTATTGGTCATAAAGTGGCAGTCTTCCTAAGAAACTACTTCATCAACCAGGACGGGACAATAACATCCTTTATTAGAGCTTTGAAGGTAGCTTGCTTATTGCATTTCTCAATGGAACCTCTAAGTCTCATACATGGGCGAGCACTAGCTGAAGAGGAGGAAGAGGGAAAATCAGCACTATCACCTGAGACTCTGATGAAATACATAGATGAACTTCCATTGTATACAAGGAATCAAATTGTTGATCATCACACTAAAAAGAGCACAGCTGAGAGTTTGTCAGAATTGGCGACAATGCAAAAGCTATGGAGTATTGCAGTTCAGTGCCTTTATGAAGCTGGAAAATATAGCAGAGTGCGACTATTGGATTTGTTTTGTGAAGCTCTCAATCATAATCTGTACCTGTCAAGGGGTTCTGATTCTCATGTGGGGGATGAAAGATATTGTGGTTTGTCTTCGACAAATGATTCCTGTCAACAATATTCCATCATGCAAAACGGTGGTTTTATTAGCCAGATAGTACGCAAAGTGAGGGATCTCCCTACAGGGATGCTATATCAGTTGATTGAGAATTGGGAAAAACTTACTGCAGATATTTCAGAGATTCACGAGAAACTGAAAGTGCTGCAATCTTCGGTTAGATGTGAAGATGGAAAGAGTCCATGCAAGAGTTCCAAGGACAATCCCAAGAGATATGCGTCCAGGATTTCAGTAAACACTGATAAGGATGCGAGAATGTTAAATTCACAGGCTATCGCATTTTTAGACTATCTAGTTGGGAATTTTTTGAAGCCCATTGAAGGCATGCCTTTCCACGAAATTTTATGCTTCAAGAATGTTGAGAAGCTTCAATTGGTTTTGATTGGAGATCCAAGAAGAAGAATTCAAGTTGATCTGTTGGAGTTCCATAAGATTTTAAGATGTAGCTGCTGTAACAAGAGTGGCAATGCCTTATTGCCATCCAGGCATGATTCCTCAATTATGTATTCTCTGGCTCAAGAGCATGGAGATCTTATCAATCTTCATGACTGGTTCCAGTCTTTTAGAACAATTGTTCTTCAAAGTAAAAATAAACGGAAGCAGAATTCAAAGCAATCCCCCCAACCAAAGAAGAGAAAAGTAAATGGATCTGCAGATCAAACCGAAGCATCAATTCAAGCACGCTTTTGCATGGCAATTACCGAGCTGCAGATCACTGGACTTGTTAGAATGCCCAGCAAGAGACGCCCAGATTTTGCGCAAAGAATAGCATTCGGTCTTTGA 2217 0.406 MAPSRSVTDSMPPTTAPEVEEKDLRPFFVLHKASSRRRDRTPTAQAKLCKRNELSSSPQNPKNLVGSMTEECDFHLFQQLQIETFDIVWAKIESTIKDVLRDLNASVFDDIQQWVLKCFNATKLLGEHTIAEATRSFPVLNNTTPGQLFTAFVVTRNIEFVDDILTFEELGHFLKSHGCHVAKLSSLEFSLKNGIAGCLKALLREFLGCAIDSADISILASWYREQVNYNKPLVLIINDLGRCSGSVLTDFILMLSEWIVKVPIIFVFGVATTVDTPRNILPSHALERLCPSSFMLGTPAERMDAIVEAVLVKHCTMFSIGHKVAVFLRNYFINQDGTITSFIRALKVACLLHFSMEPLSLIHGRALAEEEEEGKSALSPETLMKYIDELPLYTRNQIVDHHTKKSTAESLSELATMQKLWSIAVQCLYEAGKYSRVRLLDLFCEALNHNLYLSRGSDSHVGDERYCGLSSTNDSCQQYSIMQNGGFISQIVRKVRDLPTGMLYQLIENWEKLTADISEIHEKLKVLQSSVRCEDGKSPCKSSKDNPKRYASRISVNTDKDARMLNSQAIAFLDYLVGNFLKPIEGMPFHEILCFKNVEKLQLVLIGDPRRRIQVDLLEFHKILRCSCCNKSGNALLPSRHDSSIMYSLAQEHGDLINLHDWFQSFRTIVLQSKNKRKQNSKQSPQPKKRKVNGSADQTEASIQARFCMAITELQITGLVRMPSKRRPDFAQRIAFGL* 739
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu11g01018 738 CDD Orc3 588 736 - -
Lapu11g01018 738 MobiDBLite consensus disorder prediction 674 697 - -
Lapu11g01018 738 PANTHER ORIGIN RECOGNITION COMPLEX SUBUNIT 3 21 737 IPR020795 GO:0003677|GO:0005664|GO:0006260
Lapu11g01018 738 MobiDBLite consensus disorder prediction 16 46 - -
Lapu11g01018 738 CDD Orc3 83 362 - -
Lapu11g01018 738 Pfam Origin recognition complex (ORC) subunit 3 N-terminus 226 361 IPR045667 -
Lapu11g01018 738 Pfam Origin recognition complex (ORC) subunit 3 N-terminus 78 208 IPR045667 -
Lapu11g01018 738 MobiDBLite consensus disorder prediction 48 62 - -
Lapu11g01018 738 MobiDBLite consensus disorder prediction 1 62 - -
Lapu11g01018 738 Pfam Origin recognition complex winged helix C-terminal 610 736 IPR040855 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu11g01018 1 671 Core DNA Replication Machinery Family AT5G16690 45.864 0.0 608
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu11g01018 K02605 - gmx:100780646 1227.23
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu11g01018 11 12525989 12536004 Lapu11g01018 11 12525989 12536004 ECH