Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu11g01014 ATGATTCAGAACGCTGATATGAGACTCGAATCAGGGACTTGTAATGTGTGCTCAGCTCCTTGTTCATCCTGCATGCATCTTAACCGAGCTCTTATGGGGTCAAAGGCCAAAGAATTCTCTGATGAAAACTCTCGCTTAGGGGAGGCTAATCAGTATTGTATTGCTGAGGCTGATGGATCTTCTCCTGGGAGCAAAGCTTGTGAAAGATTGAAGAAGCATGCTGTCAACGAAACCAGTCACAAGCCTAGCATTTCTTCAACTCATGATTCTCGGTCTGAAAATGGACAGGCCTTATCTGAGAAATATCCGGATTCCAAGTGTTTAGAAAGTCTTGATGATATCACTTCTTGTATCAGTAGGACCAGTAATGCTAATTTAGCGAGTGATAGCCAACAAGTAAATACAGACAGAATAAATATATCTTGTAGTTCGACTTCAGTTAGTCACTTAGAGGCAGAAGGATCTGGAAATGGGCCATCTGTTGACATGTCTGGTTTGTCAGAATGCTGTGTGGAAAAAATGGATTCATCATTTACCGAAGAGAGAGTGCCTATTATTGCTGCTGGTGAAAAATCTGTGACAGATAAAGAAAACCTAAATAATTGTACAGCCAAAGTTTCACTGGAAATATGTCCAAAGTCTGAAGCAGATGTCGGAAATAATGTTGATGTTGCTAAAGATGAAGATCGTAAATATTCAGCTCATGATGGACTGCATGAGAAGGTTGAGGAGCTGTTTAAATCATCTGGCAGGTCTGAACCTCAATCAGAAGACGAGGGTGATGAATCAGATGTTGTTGAGCATGATGTAAAAGTATGTGACATCTGCGGAGATGCTGGTCGCGAAGACCTACTTGCCATATGTAGTAGGTGTAGTGATGGTGCAGAACACACCTACTGCATGCGGGAAATGCTTGTAAAGCTCCCTGAAGGTGACTGGTTGTGTGAAGAATGCAAGTGTGCTGAGGAGACTACAAATCGAAGACTAGTTATTGAAGGAAAAAAACTTCATAAAGTTATTTCAAATTCACAAATTTCTGGCAAAAGACCTTGTCAAAGCATGGAAATAGCTACAGCAGCAAAAAGGCAAGCTCTTGAATCGAGCACAGGATCACCGAAGGCATCAAGCCCAAAGAAATTAGTCTCATTGTCACGAGAATCTTCTCTCAAGAACATGGATAAAGGAAAGATGAAATCTGGGCAACAGATCCCCATGCGTAACCACCTTGGTGGTGATGACGTAGACCTTGCACGTTCTCTTTCCATCGGCCCTAAAAGTCAAAACCTAAGGAGTACATTGTTGAAGTCCAATTCATTCAACAACTTCAATTCCAAGCCTAGAATCAAACTTGTCGATGAAGTTGTTCCCCAAAAGCAGAAAGGGGGTGCCGAACATATTTCTAAGAATGCTGAGACACCTGCTGGGATGATAAGCAAATCAATGTCATTCAAATCCTCACACGTGGGGCGTTCAAATACTACTGAATCAAAAGTGAAATCAATTTTTTCTAAACCTGGAATTGTTCATGATTTGAAAGCATTAAGACATACGAAAGGATCAGGTTCATTTGACCGGAAATTTCTACCTAAGATTGATCGACCTGTCAATTGTTCAACTATGGTTAGTTCTGTTATTTCCACATCAAAAGGTGATCATAAGCTTGCACCTCATGGTGAAACTGCTAAACCTTGTACAATTAACAACAATCGAGAGTTTAAGTTCAACCAAGATGGAAAAGTATATCCATTATCAAAGTCTATGAATAATACAAGTAGCAGAAGTCCAGAACCTCAAGTTAGTTCAGATAGAACATCAACCAGTGTTGATGACACTCAACAGGAAACTGTTAGTCAGGTTGACAGAACCAAAGATAGTTCTAGTGATCATGTGAGGTCAGGTGTTACTAATGCCTCAAAAAGTTCATTATGTCGTAAATGTAAAGATTTTGGCCATGCTACAGAATGTTGCTCGATTAGTGGTACACAGGAATTTGGTGCCGAAGCATCAGTCACTGCTACAAGTAGTTCAAAAGAGGAGATGCATAAGGGAAATAGATTGAAAGCTGCAATCCAGGCAGCTTTGCTTAGAAGGCCTGAAATACACAAGAAGAAAGAAGGTCCTGATGAAACTAATGAGTTTCCTACATCAAGCACTGTTTCCAAACGTGAAGTCACTTCTCAAAACCAAGTGTTGGTTTCCAACACATTAAAGAATAATATATCGGCTGAAGAAACCAAGGTGAAGATGGAAATTGTTGAGAGTTCTTCATTTGAGACCTCTAAATGTCCATCTGCTAATGATCCAAAGCAACTTAAATTTTGCCAAACTGATCTTTGCTCTCAGCTGAGAAAATCAGATTTTGTTGGTCTCACTTCTAGAAAGCCTGTAGTGACAGACTTTCCTGATAATGGCATGGTGATCACAAGTGTTCTTTCAAAGATGTCAGTCATTCCAGAATATGAGTATATCTGGCAGGGTGTATTTGAAGTGCATAGAAACGGAAAGCCTCCTGTCTTGCATGCTGGAATCCAGGCACATTTGTCTGCATGTGCTTCTCCCAAGGTTATCGAGACAGTGAAGAATTTTTTACCTGAAGTTTCCCTAAATGAAGTTTCTCGATTGAGCACATGGCCTTCACAGTTTCATCAAACTGGTGCTAAGGAAGATAATATTGCTCTTTACTTCTTTGCTAAAGACAATGAAAGTTATGATAGACACTACAAGGTTCTATTGGATCACATGATTAGAAATGATTTGGCACTTAGGGGGACGTTTGATGGTGTTGAGCTTCTCATATTTGCATCCAATCAGCTTCCGGAAGATTCACAACGTTGGAATATGTTATTTTTCCTATGGGGTATATTTAGAGGGAGGAGGATCAATCATTCAAATTCCACAAAAAATATATGTATTCCCAGTTTGAATGCGATGCCAAATGAGAAGGATTTTCCGTCTGCTGTCATGACTTTGTCAGAAACTTGGTGTTCACCAAAGCGCATGGATGAAGAGTCCATCGACCAAGGTCACAATATGGTATGCAGGAATTTTGATAGTGAAGAAACTGTGTTTGGCCAGACACATTTGGGGTTGCAAGTAAAGTTGGAGAGACAAGACACTAGAGTCAGCAGCAAATCTACCTCCGGAATTCTGATCGCGAGTACGCAATTGTGTCAAGAAATGAATTCCACTAGATCGTCCCTGGGATATAGTGTACCAGAGCATCGACAATACATAGAGTCTAAACCTCCTGAAGCAATGGGAACTAGTGTAGGAAGTAGGATCGTGGAAACAAAAACTAATCCTGATATTTCTTGTAAGCAAGAGACCTCTTTGTCTTCGGAGATTCCTTCTGTCGATAGCCAAGAGATAGATACTGCAAGTAATGTCAGTAAGGATAAAATTTTGGAGAGAACAAAATATGATGAGAATCAGCAAAGGCCTAAAAGGAAACAGTTGGAAAATGATCTCAATATTAACGAGGAGGCAACGTTTGAGGGAGACCTGGATTTGAAAGGGGTCAACTGCCAGGCACCTAATGATAAAAAAATTAAGCATATAGATCTTTCAGATACAGTTGTGGAGACTTCTGCGGTTAGTTTTCAGAAACGTCCTTTCAACGAGATAAATGGCAAATTGGAAGACATAGAAAGTAGTAAGAAGCTGCAAACAAGTTTGGGTGGAGTATTTCGATGTAACGATTCTGCTGGATCCAGGGGCTCTTTTAATGGTAGTTTTGCATCACTTGTAAACGATCTTGGTTCCTGTTCTTCAGTGGACAAAGGGTGCAAAGAAGCTTGCGATGAGAAAATCATCCACGAGGACTTGGGAACGATGGAAAGAACTTTTTTTCCTGTTGATATTCGTAATAAACTTAACTCGGGGATGGTGGTGAACAAGGAGTCACTGAATGGGCCTCGTGAGTACGTGGACCAATTTCCAAATTTGGAGCTTGCTTTGGGGGGTGAAACGAAACCATCACGCAAGGGTATGCTGCCTTTTTTTGTGGGTGCAGTTGACAAGAAAATTAACCGGGAAAAGACTCCAGATGTTGAGCGAGAGGATGAGAACGTTGCTGCATCTCTTTCCTTGTCACTTTCCTTTCCATCTTCAAGCAAGGAACAAATCAAACCAGTCACAAAAAATGAGCCTTTGCCTGATGGGCATAACGCCAAATCCCCGTTTCTTCTTTTTGGGAGATTCACGGACAAATAA 4212 0.4069 MIQNADMRLESGTCNVCSAPCSSCMHLNRALMGSKAKEFSDENSRLGEANQYCIAEADGSSPGSKACERLKKHAVNETSHKPSISSTHDSRSENGQALSEKYPDSKCLESLDDITSCISRTSNANLASDSQQVNTDRINISCSSTSVSHLEAEGSGNGPSVDMSGLSECCVEKMDSSFTEERVPIIAAGEKSVTDKENLNNCTAKVSLEICPKSEADVGNNVDVAKDEDRKYSAHDGLHEKVEELFKSSGRSEPQSEDEGDESDVVEHDVKVCDICGDAGREDLLAICSRCSDGAEHTYCMREMLVKLPEGDWLCEECKCAEETTNRRLVIEGKKLHKVISNSQISGKRPCQSMEIATAAKRQALESSTGSPKASSPKKLVSLSRESSLKNMDKGKMKSGQQIPMRNHLGGDDVDLARSLSIGPKSQNLRSTLLKSNSFNNFNSKPRIKLVDEVVPQKQKGGAEHISKNAETPAGMISKSMSFKSSHVGRSNTTESKVKSIFSKPGIVHDLKALRHTKGSGSFDRKFLPKIDRPVNCSTMVSSVISTSKGDHKLAPHGETAKPCTINNNREFKFNQDGKVYPLSKSMNNTSSRSPEPQVSSDRTSTSVDDTQQETVSQVDRTKDSSSDHVRSGVTNASKSSLCRKCKDFGHATECCSISGTQEFGAEASVTATSSSKEEMHKGNRLKAAIQAALLRRPEIHKKKEGPDETNEFPTSSTVSKREVTSQNQVLVSNTLKNNISAEETKVKMEIVESSSFETSKCPSANDPKQLKFCQTDLCSQLRKSDFVGLTSRKPVVTDFPDNGMVITSVLSKMSVIPEYEYIWQGVFEVHRNGKPPVLHAGIQAHLSACASPKVIETVKNFLPEVSLNEVSRLSTWPSQFHQTGAKEDNIALYFFAKDNESYDRHYKVLLDHMIRNDLALRGTFDGVELLIFASNQLPEDSQRWNMLFFLWGIFRGRRINHSNSTKNICIPSLNAMPNEKDFPSAVMTLSETWCSPKRMDEESIDQGHNMVCRNFDSEETVFGQTHLGLQVKLERQDTRVSSKSTSGILIASTQLCQEMNSTRSSLGYSVPEHRQYIESKPPEAMGTSVGSRIVETKTNPDISCKQETSLSSEIPSVDSQEIDTASNVSKDKILERTKYDENQQRPKRKQLENDLNINEEATFEGDLDLKGVNCQAPNDKKIKHIDLSDTVVETSAVSFQKRPFNEINGKLEDIESSKKLQTSLGGVFRCNDSAGSRGSFNGSFASLVNDLGSCSSVDKGCKEACDEKIIHEDLGTMERTFFPVDIRNKLNSGMVVNKESLNGPREYVDQFPNLELALGGETKPSRKGMLPFFVGAVDKKINREKTPDVEREDENVAASLSLSLSFPSSSKEQIKPVTKNEPLPDGHNAKSPFLLFGRFTDK* 1404
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu11g01014 1403 MobiDBLite consensus disorder prediction 581 620 - -
Lapu11g01014 1403 MobiDBLite consensus disorder prediction 79 99 - -
Lapu11g01014 1403 MobiDBLite consensus disorder prediction 711 726 - -
Lapu11g01014 1403 SUPERFAMILY FYVE/PHD zinc finger 260 324 IPR011011 -
Lapu11g01014 1403 MobiDBLite consensus disorder prediction 699 726 - -
Lapu11g01014 1403 MobiDBLite consensus disorder prediction 73 101 - -
Lapu11g01014 1403 PANTHER - 270 1026 - -
Lapu11g01014 1403 SMART PHD_3 272 319 IPR001965 -
Lapu11g01014 1403 MobiDBLite consensus disorder prediction 575 634 - -
Lapu11g01014 1403 MobiDBLite consensus disorder prediction 1365 1391 - -
Lapu11g01014 1403 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 256 343 IPR013083 -
Lapu11g01014 1403 MobiDBLite consensus disorder prediction 245 265 - -
Lapu11g01014 1403 MobiDBLite consensus disorder prediction 360 407 - -
Lapu11g01014 1403 MobiDBLite consensus disorder prediction 1098 1124 - -
Lapu11g01014 1403 MobiDBLite consensus disorder prediction 362 388 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu11g01014 Lapu-Chr11 12482421 12492648 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu11g01014 177 356 C2H2 Transcription Factor Family AT3G01460 23.333 1.73e-07 54.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu11g01014 - - vun:114169861 2295