Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu11g01012 ATGGCTGCCGCTGACAACACCAACCCTCCTAAGGATTATTACAAAGTGTTGGAGGTTGGTTATGATGCAACTGATGAAAATATCAAATTAAATTACCGAAGGCTCGCATTGAAATGGCATCCTGACAAGCACGGAGGTGACAGTGCTGTTACTGCAAAATTTCAAGAGATAAATGAAGCTTATAATGTATTAAGTGATCCTGCCAAGCGTTTAGACTATGATTTAACAGGGATATGCGAGATTGAAAAATATAGCTTGCAGGAATATCTTGCCAGATTTAAGGGCATGATTCTTACCTGCAATGGACTTGGTATCAATCAAACAGACAGATGGTCACAACAATTGATTGAAAATTTTGAATCCCTAGATAAATAA 375 0.3787 MAAADNTNPPKDYYKVLEVGYDATDENIKLNYRRLALKWHPDKHGGDSAVTAKFQEINEAYNVLSDPAKRLDYDLTGICEIEKYSLQEYLARFKGMILTCNGLGINQTDRWSQQLIENFESLDK* 125
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu11g01012 124 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 5 108 - -
Lapu11g01012 124 CDD DnaJ 12 66 IPR001623 -
Lapu11g01012 124 FunFam Chaperone protein DNAj, putative 4 91 - -
Lapu11g01012 124 Pfam DnaJ domain 12 74 IPR001623 -
Lapu11g01012 124 ProSitePatterns Nt-dnaJ domain signature. 54 73 IPR018253 -
Lapu11g01012 124 PRINTS DnaJ domain signature 49 69 IPR001623 -
Lapu11g01012 124 PRINTS DnaJ domain signature 69 88 IPR001623 -
Lapu11g01012 124 PRINTS DnaJ domain signature 14 32 IPR001623 -
Lapu11g01012 124 PRINTS DnaJ domain signature 32 47 IPR001623 -
Lapu11g01012 124 SUPERFAMILY Chaperone J-domain 9 97 IPR036869 -
Lapu11g01012 124 ProSiteProfiles dnaJ domain profile. 12 77 IPR001623 -
Lapu11g01012 124 SMART dnaj_3 11 69 IPR001623 -
Lapu11g01012 124 Gene3D DnaJ domain 2 90 IPR036869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu11g01012 Lapu-Chr11 12466515 12471776 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu11g01012 3 74 C2H2 Transcription Factor Family AT1G74250 40.260 6.76e-11 56.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu11g01012 - - gmx:100305987 243.047