Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu11g01006 ATGAGAGATATTTGTCGAAACTTCCAGCGAGGCAGCTGTCAATATGGAGAAAGGTGTAGATATTTACATGTCAACCAACAGAGAAAACCTAACGTTCAAGGTTTTGGAGGACAGAACGGTTCTCACCAACAGCAAAGTACAAATCCTTTTGGATTTGGGTCTGGCTCTGGCTTTGGGTCACAACAACAGCAGAAGTCTAATCCTTTTGGTTTTGGCACGCAGAACAGCTCCCAGTTAAACGGGGGGCCTCGTTCTGAGTATAAACCGAACCAATACAAGCCTTTTGAAAACAAATGGAATCGACAGTCCTCCAAACCCCAGAATGGTGTGAAATCTGATAACAACCCCCAACCTGTCGATCATAAATGCACAGATCCTGAGAACTGCAAGCGCCAGATTGCAGAAGATTTCCAGCAAGAGAAACCAATTTGGATACTTACATGCTATAGTCATTGCAAAGGTGGTCCTTGTGACATTGTTGGTGATATTAGCTTTGAAGAATTGCGGGCATCAGCTTATGAGGATGCTAAGAGTGGGATGAGTTTGCAAACAATAGTTGAGAAAGAGAGAAATATACTAAAATCCAAGATGCTTGAATTTGAGAAACTACTTTCTGAACCTTACCAAAAGCCAATAAATTCTTCTCTTGACAGTCAAAGACCCCAATCTATTGGAGCCAATGCAAATCTGTTTTCAGGAACATCTCAAAGCAATGGTCCTTTGTTAGTCTCAAGCTTTAGCCAACTGGGTACTTCAATGAACATGGGTTATGAAAGGCCATCTGCACCACCAACAAACACTCTGGCACAGCCTAGTTTCTTTGGAATTGGAGGAAACTCTTTGGCATCCAACTCAGCAAACCTAAACATCAATGGCACCTTTGGTGTTCAAAGTAACCCTCATTCTACACCAGTGGATTTAACAACGTTTCCGGGTTCAACTCAGCAAACATCAGCCGCATTCAATAACTCTGGTCACAATGCAATGTTTCAAACAACATCAGATGTCCAGTTGTCAAATAAGTTACAAGTGGAGAATGTGTCAGGAGATGTCAGTATTTGGTTAAAAGAGAAATGGAATCCGGGAGAGATTCCAGAAGAAGCTCCTCCTGATTCACTCGTACGGTAG 1128 0.4229 MRDICRNFQRGSCQYGERCRYLHVNQQRKPNVQGFGGQNGSHQQQSTNPFGFGSGSGFGSQQQQKSNPFGFGTQNSSQLNGGPRSEYKPNQYKPFENKWNRQSSKPQNGVKSDNNPQPVDHKCTDPENCKRQIAEDFQQEKPIWILTCYSHCKGGPCDIVGDISFEELRASAYEDAKSGMSLQTIVEKERNILKSKMLEFEKLLSEPYQKPINSSLDSQRPQSIGANANLFSGTSQSNGPLLVSSFSQLGTSMNMGYERPSAPPTNTLAQPSFFGIGGNSLASNSANLNINGTFGVQSNPHSTPVDLTTFPGSTQQTSAAFNNSGHNAMFQTTSDVQLSNKLQVENVSGDVSIWLKEKWNPGEIPEEAPPDSLVR* 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu11g01006 375 MobiDBLite consensus disorder prediction 30 85 - -
Lapu11g01006 375 PANTHER MAKORIN-RELATED 5 275 IPR045072 GO:0000209|GO:0061630
Lapu11g01006 375 SMART c3hfinal6 1 25 IPR000571 GO:0046872
Lapu11g01006 375 SUPERFAMILY CCCH zinc finger 3 27 IPR036855 GO:0046872
Lapu11g01006 375 Gene3D - 1 78 - -
Lapu11g01006 375 MobiDBLite consensus disorder prediction 30 126 - -
Lapu11g01006 375 Pfam CCCH-type zinc finger 4 23 IPR041367 -
Lapu11g01006 375 ProSiteProfiles Zinc finger C3H1-type profile. 4 26 IPR000571 GO:0046872
Lapu11g01006 375 MobiDBLite consensus disorder prediction 95 117 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Lapu11g01006 zf-CCCH_4 1e-07 CL0537
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu11g01006 K14321 - gmx:100814339 588.956