Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu11g00992 ATGTCAGAAGCAGTTACTTTGGTTGAAACTCAACACAATAGCAGAGAATCTTGTGGACCTAAAACACCCCAAACTACCCACATTTTCAGATCAAAGTTACCAGACATACCCCTACCCAACAACCTCCCCCTCCACGCATACTGCTTCCTTAAACTTTCCGAAATCGCCCACCGTACATGCCTCATCGCCGCCCCCAGAACCTACACCTACGCCGACACTCACCTTGCCTCGCGGAAGGTGGCCGCAGGCATGTCGAAGATGGAAATCCAAAAGGGCGACGCTGTCATGATTCTCCTCCCCAACTCCCCGGAGTTTGTGTTCTCCTTCATGGCTGCCTCCATGCTCGGCGCCGTCGCCACAACGGCCAACCCCGCCTACACCGCCGCCGAAATCGCCAAGCAACTCACCGCCTCCAACGCCAAGCTCATCATCACCCTATCCGCACACGTCCACAAGCTCAACCAGCAAGCGCACCACCACTTCTTCAAGGTGGTCACCGTCGACGACCCGCCGGAGAATTGCACGAGTTTCCCGGAGGGTGAGGATAGCGAGGTTCCGGAGGTTGAGATATCAATGGAGGACGCGGTGGCGCTGCCGTTTTCCTCGGGGACGACGGGGCTGGCGAAGGGGGTGGTTCTGACGCACAAGAGTTTGGTAACGGGCGTGGCGCAACAGATGGAGGGAGAGAACCCGAACTTGTACCTGAAGGAAGATGACGTTGTGCTGTGCGTGCTTCCTCTTTTTCACATATTCGCCATGCACAGCGTGATGATGTGCGCTCTAAGAGCAGGGAGTGCCATTTTGTTGATCGAGAAGTTTGAGATAAGGTCGCTGCTGGAGGCGATTGAGCGGCACAGGGTGACGGTGGCGATACTTGTGCCACCGCTGGTGGTGGCGCTGGCGAAGAACAGGGCGGTGGAGGAGTACGATTTGAGGTCGATACGTTTGGTTATGTCGGGTGCTGCGCAGCTGGGGCAACAGGTAGAAGAGGCTCTGCGGAATAGGTTGCCTGACGCCATTCTGGGACAGGGCTACGGGATGACAGAGGGTGGACCAGTGTTGGCCATGTCTTTGGGCTTTGCAAAGTATCCATTCCCAACCAAGTCTGGTTCATGCGGAACTGTGGTCAGAAATGCTGAGTTGAAGGTGATTCACCCTCTAACTTCCTCTTCTCTTCCCCGCAACCACCCTGGCGAGATTTGCATCCGTGGCCCACAGATCATGAAAGGCTACCTCAATGACCACAAGGCCACTGCAGCAACTATTGATCTAGATGGTTGGCTTCATACAGGTGATATTGGCTATGTCGATGATGATGATGAGATTTTCCTCGTTGACAGGGCCAAGGAGCTCATCAAATTCAAAGCCTTCCAGGTGCCACCAGCAGAGCTTGAAGACCTTCTTGTGAGCCACCCTTTCATTTCAGATGCAGCTGTTGTCCCGCAAAATGACGAGGCTGCGGGTGAAGTTCCGGTGGCTTTCGTGGTCAGCTTTGATCTTACAGAGGATGCTGTAAAGGATTTTGTAGCTAAACAGGTAGTGTTTTACAAGAGACTACACAAAGTGTATTTTGTTCATGCAATTCCAAAGTCTCCAACCGGAAAGATATTAAGAAAAGAACTGAGAGCAAAGCTGGCGAGCATCACTGAGAGGAGCTAG 1659 0.5335 MSEAVTLVETQHNSRESCGPKTPQTTHIFRSKLPDIPLPNNLPLHAYCFLKLSEIAHRTCLIAAPRTYTYADTHLASRKVAAGMSKMEIQKGDAVMILLPNSPEFVFSFMAASMLGAVATTANPAYTAAEIAKQLTASNAKLIITLSAHVHKLNQQAHHHFFKVVTVDDPPENCTSFPEGEDSEVPEVEISMEDAVALPFSSGTTGLAKGVVLTHKSLVTGVAQQMEGENPNLYLKEDDVVLCVLPLFHIFAMHSVMMCALRAGSAILLIEKFEIRSLLEAIERHRVTVAILVPPLVVALAKNRAVEEYDLRSIRLVMSGAAQLGQQVEEALRNRLPDAILGQGYGMTEGGPVLAMSLGFAKYPFPTKSGSCGTVVRNAELKVIHPLTSSSLPRNHPGEICIRGPQIMKGYLNDHKATAATIDLDGWLHTGDIGYVDDDDEIFLVDRAKELIKFKAFQVPPAELEDLLVSHPFISDAAVVPQNDEAAGEVPVAFVVSFDLTEDAVKDFVAKQVVFYKRLHKVYFVHAIPKSPTGKILRKELRAKLASITERS* 553
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu11g00992 552 ProSitePatterns Putative AMP-binding domain signature. 198 209 IPR020845 -
Lapu11g00992 552 SUPERFAMILY Acetyl-CoA synthetase-like 27 548 - -
Lapu11g00992 552 Gene3D - 21 447 IPR042099 -
Lapu11g00992 552 Pfam AMP-binding enzyme 58 454 IPR000873 -
Lapu11g00992 552 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 24 543 - -
Lapu11g00992 552 FunFam 4-coumarate--CoA ligase 2 450 548 - -
Lapu11g00992 552 CDD 4CL 38 541 - -
Lapu11g00992 552 MobiDBLite consensus disorder prediction 1 23 - -
Lapu11g00992 552 FunFam Long-chain-fatty-acid--CoA ligase FadD 30 449 - -
Lapu11g00992 552 Gene3D - 448 548 IPR045851 -
Lapu11g00992 552 Pfam AMP-binding enzyme C-terminal domain 463 535 IPR025110 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu11g00992 Lapu-Chr11 12353456 12355716 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu11g00992 7 480 Monolignol Biosynthesis Gene Families AT3G21240 60.166 0.0 595
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu11g00992 K01904 - gmx:100790396 893.649