Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu11g00990 ATGGATGCCACCAAGGATCATCAAAATGTTGTAACCATAGATGTCCATGCTGCCAAAGATCTGCTAAATTCATCAGGCTATCGTTATCTGGATGTGAGGTCAGTTGAGGAATTCAATAAAAGCCATGTTGAGAATGCTTATAATGTTCCCTATATGTTCATCACAGAAGCAGGACGTGTGAAAAATCCAGATTTTGTTGAGCAGGTGGGAGCAATATGCAGGAATGAGGATCATTTAATTGTGGCTTGCAATAGTGGAGGAAGATCACTCCGAGCCAGCGTTGATTTGCTTGATTCGGGATTTAAACATATTGTGAATATGGGAGGAGGCTATTCTGCATGGGTTGATGCTGGATTTGTTGGGGACATGCCAGCACAAGAGCTCAAAACTAGTTGTAAGATTAGTCGTTAA 411 0.4161 MDATKDHQNVVTIDVHAAKDLLNSSGYRYLDVRSVEEFNKSHVENAYNVPYMFITEAGRVKNPDFVEQVGAICRNEDHLIVACNSGGRSLRASVDLLDSGFKHIVNMGGGYSAWVDAGFVGDMPAQELKTSCKISR* 137
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu11g00990 136 ProSiteProfiles Rhodanese domain profile. 23 123 IPR001763 -
Lapu11g00990 136 PANTHER THIOSULFATE SULFURTRANSFERASE 18 4 122 IPR044684 GO:0003824
Lapu11g00990 136 Gene3D - 2 120 IPR036873 -
Lapu11g00990 136 CDD RHOD 18 115 - -
Lapu11g00990 136 Pfam Rhodanese-like domain 17 116 IPR001763 -
Lapu11g00990 136 SMART rhod_4 13 120 IPR001763 -
Lapu11g00990 136 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 8 119 IPR036873 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu11g00990 Lapu-Chr11 12344832 12345912 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu11g00990 1 119 Sulfurtransferasese or Rhodanese AT5G66170 46.281 6.71e-36 119
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu11g00990 K22547 - gmx:100794624 248.44