Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu11g00988 ATGAAATGCTGTGATGTGATTTGCAGAGGAGAAGAGGGAATGGCTTACATGTGTGCAGACAGTGGCAACCTCATGGCCATTGCGCAGCAAGTCATCAAGCAGAAGCAGCAGCAAGAGCAGCAACAGCAGAAGCAGCAGCAGCAACACCACCAACACCATCATCACCACCACCACCACCACCACCACCAACACCATCTCAACCCCCTCTCTCTCCATCCAATTCCATGGAACAACACTCCCACTCTCGGCTACCCTCTCCATCCCACCGACTTCCCTGACCCCTTCCAACCCGATCCTCCATTCCCCTTCCCGGACCCCCAATCCGCGCCCGCCCCCGCCCCCTTCCGCTTCTCCGATTTCGACTCCGACGACTGGATGGACTCCCTCATCGCCGCCGCCGACACCCCCTCCTGGCACACCAATGCCGATTTCCCCTTCCCCTCCGATCTCAACCGCCTCATCTTCCCCTCCTCCGACACCGCCACCACCTCACTCCCCCTCCAACCAACCCCTCCCCCGCCCCCGCAGGAACCCGTCGACACCGGCCTCTCCTCCGAACCAGACTCCGCCCACCCGCTCCTCAAAGCCCTAACCGAGTGCGCCTCCCTCGCGGAAACCGAACCGGATCAGGCCGCGGAATCCCTAACCCGGCTGAGAAAATCCGTATCCCAGCACGGAAACCCCACTCAGCGTGTGGGCTTCTACTTCTGCGAAGCCCTCTCCCGTAAAATATGGGCCGAGAAAGAGAAGGCGGAGCCCAATAGCAGAACCACCACCACCACAACCACCTCGGAGGAATTAACACTGTCTTACAAAGCCCTGAACGACGCCTGCCCTTACTCCAAGTTCGCACACTTAACCGCCAACCAAGCCATCTTAGAAGCCACCGAAGGCGCCTCCAACATCCACATCCTCGACTTCGGCATCGTCCAAGGGATTCAATGGGCCGCGCTCTTGCAAGCCTTCGCCACTCGCTCTTCTGGAAAGCCCGATAAGATCAAAATCTCCGGAATTCCCGCCATCGCTCTTGGGGCCTCTCCCGGCCCATCTCTCTCCGCCACCGGCAACCGTCTCTCCGAGTTCGCGAAGCTCCTGGACCTGAACTTCGAGTTCACGCCTATTCTCACTCCCATTCACGACCTCGACCACAACAGCTTTTGCATTGAACCAGACGAGGCCTTGGCTGTTAACTTCATGCTCCAGTTGTATAACCTCTTGGATGAGCCTCCCACCGCGGTTGACACCGCCCTCAGGTTGGCTAAATCTCTCAACCCCAAAATCGTCACCCTCGGTGAGTACGAAGCAAGCTTGACACGTGTCGACTTTCTTAACCGCTTCAAGACCGCCTTCAAGTACTTCTCTGCTGTGTTCGAGTCTCTGGACCCTAACTTGCCCGCTGACTCGGCCGAAAGGTTTCAGGTGGAGAGTCGTCTCCTGGGCCGCCGAATCGCGGCGGTGATTGGGCCCGGGCCCCTGCGGGAGAGAATGGAGGACATGGAGCAGTGGAGGGTTCTGATGGAGCGTGCTGGCTTTGAGTCTGTGAGTCTCAGTCATTATGCTATTAGTCAAGCAAAGATACTTCTCTGGAATTACGGTTACAGTTCTCTGTTTTCGCTGCTCGAATCTACACCGCCGGCTTTCTTGTCTCTGGCCTGGAAAGATGTTCCTCTCTTGACTCTCTCCTCCTGGCGTTAA 1695 0.5758 MKCCDVICRGEEGMAYMCADSGNLMAIAQQVIKQKQQQEQQQQKQQQQHHQHHHHHHHHHHHQHHLNPLSLHPIPWNNTPTLGYPLHPTDFPDPFQPDPPFPFPDPQSAPAPAPFRFSDFDSDDWMDSLIAAADTPSWHTNADFPFPSDLNRLIFPSSDTATTSLPLQPTPPPPPQEPVDTGLSSEPDSAHPLLKALTECASLAETEPDQAAESLTRLRKSVSQHGNPTQRVGFYFCEALSRKIWAEKEKAEPNSRTTTTTTTSEELTLSYKALNDACPYSKFAHLTANQAILEATEGASNIHILDFGIVQGIQWAALLQAFATRSSGKPDKIKISGIPAIALGASPGPSLSATGNRLSEFAKLLDLNFEFTPILTPIHDLDHNSFCIEPDEALAVNFMLQLYNLLDEPPTAVDTALRLAKSLNPKIVTLGEYEASLTRVDFLNRFKTAFKYFSAVFESLDPNLPADSAERFQVESRLLGRRIAAVIGPGPLRERMEDMEQWRVLMERAGFESVSLSHYAISQAKILLWNYGYSSLFSLLESTPPAFLSLAWKDVPLLTLSSWR* 565
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu11g00988 564 MobiDBLite consensus disorder prediction 31 73 - -
Lapu11g00988 564 MobiDBLite consensus disorder prediction 166 180 - -
Lapu11g00988 564 Pfam GRAS domain family 194 564 IPR005202 -
Lapu11g00988 564 MobiDBLite consensus disorder prediction 31 45 - -
Lapu11g00988 564 ProSiteProfiles GRAS family profile. 184 564 IPR005202 -
Lapu11g00988 564 MobiDBLite consensus disorder prediction 47 67 - -
Lapu11g00988 564 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 153 558 IPR005202 -
Lapu11g00988 564 MobiDBLite consensus disorder prediction 90 111 - -
Lapu11g00988 564 MobiDBLite consensus disorder prediction 159 189 - -
Lapu11g00988 564 MobiDBLite consensus disorder prediction 85 118 - -
Lapu11g00988 564 Coils Coil 25 48 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu11g00988 Lapu-Chr11 12324474 12328415 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu11g00988 14 564 GRAS Transcription Factor Family AT5G66770 55.611 0.0 561
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Lapu11g00988 GRAS 3.3e-106 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu11g00988 - - vum:124844288 905.59