Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu11g00965 ATGGAGATAGAATCAGCCAGTGCCAAGCAAAAGGGTGTTTCTGAGTGTGGTGATGAAAGGATGAGAGTTTCAGAAAAGAGAGGGATGTATCTTGTGTGGGAAGATTTAACTGTTGTGGTTCCAAATTTTGGGAATGGACACACCAAGAGATTGCTTAATGGGTTGAGTGGATATGCTGAACCTAACAAAATCATGGCCATCATGGGTCCTTCTGGTTCTGGAAAATCCACTCTTCTTGATGCATTAGCAGGAAGACTGTCAAGAAACGTTATCATGTCTGGAAACGTGTTTTTAAATGGAAAGAAGAGAAGATTGGAGTATGGAGGTGTAGCTTACGTGACCCAAGAAGACACGATGCTGGGAACACTAACAGTGAGAGAGACGATATATTACTCAGCGAATCTAAGGCTTCCAGGGAGCATGAGGAAAGAAGAGGTGAAAGAGATAATAGAGGGGACGATTAGGGAAATGGGTCTGGAAGAATGTGCAGATCGAGTAATAGGGAATTGGCACTTGAGAGGGATAAGCGGTGGAGAGAAGAGAAGGCTAAGCATAGCACTTGAAATCCTCACAAGGCCTACCCTCTTGTTCCTTGATGAACCCACCACTGGTCTCGACAGTGCCTCAGCTTATTTTGTTGCCCAAACTCTCAGAAATTTGGCTCATGATGCCAAGACTGTTATCTCTTCCATACACCAACCAAGTAGTGAGGTTTTTGCACTCTTTGACCATCTCTTTCTTCTTTCTGGGGGTCAAACAATATACTTTGGCCCTGCACACAAGGCAACTCAGTTCTTTGCCAAAGCGGGATTCCCGTGTCCAAGTAGACGAAACCCTTCTGATCATTTCCTCCGTTGTATCAATTCAGATTTCGACGCAGTCACAACCGCAACCACCACCTCCCAAACAATACAAGAAGGAATATCATTATCAACTGCAGAAACCAAAGCAATACTCGTAGAAAAATACCGATGGTCAGAGCACGCAACCACTGCTAGAGCAAGAATCAAGGAAATCTCAAGCATTGAAGGGCATGATTTTGAAAGGAAAAGCGAATGCGAAGCAAAATGGTGGAAGCAACTGTCAATGCTGACTAAGAGATCTTTCGTGAACATGTCCAGAGATGTGGGATACTACTGGATTAGGATAACCATCTATATTGCGTTATCTTTGTGTGTTGGAACAATCTTCTATGAAGTTGGATCGAGTTATAGAGCCATTTTTGCAAGAGGAGCATGTGGCGCTTTTATCTCAGGTTTCATGACATTCATGTCTATAGGGGGCTTCCCTTCTTTTATAGAAGAAATGAAGGTCTTCAATAAAGAAAGACTGAATGGGTATTATGGCGTTGGAGTCTACATTCTCTCAAATTTTCTCTCTTCTTTTCCCTTTGTGACAGTGATGTCCATTGCGACAGGGACAATAACCTATTATATGGTTAAGTTTCGTTCAGAATTTTCACATTATGTGTATATATGTCTGGATCTCATTGGGTGCATTGCGGTTGTGGAGAGCTCCATGATGATTATAGCTTCACTGGTGCCCAACTTCCTCATGGGATTGATAATTGGAGCAGGATATATTGGTGTTATGATGATGACTGCGGGCTATTTCCGTCGGATCCCTGATCTTCCCAAATTCTTCTGGCGTTACCCAATATCATACATCAATTATGGTGCATGGGGATTGCAGGGAGCTTACAAGAATGACATGATTGGGATGGAGTTTGAACCCTTAGAACCTGGAGCTCCAAAACTGAAAGGAGAATTCATCCTGAAAAGCGTGCTTGGAATTGAAATTGATAATTCAAAGTGGTGGGACTTGGGTGCAGTGATGATGATCCTGATAATGCTTAGGGTTCTTTTCTTTTTTATTCTGAAATTTAAGGAGAAAGTTGGACCTTTGTTTTATAGTATCTACGCCAGGCAAACTCTGCAACGTATAAAGAAGCGACCTTCGTTCAGGAAAGGACCATCTTTCCCTTCTAAAAGACACCAATCACTGCATCCCTTAGGGATGTATCTTGTGTGGGAACATTTAACTGTTGTGGTTCCAAATTTTGGGAATGGACACACCAAGAGATTGCTTAATGGGTTGAGTGGATATGCTGAACCTAACAAAATCATGGCCATCATGGGTCCTTCTGGCTCTGGAAAATCTACTCTTCTTGATGCTTTAGCAGGAAGACTGTCAAGAAACGTTATCATGTCTGGAAATGTGTTTTTAAATGGAAAGAAGAGAAGATTGGAGTATGGAGGAGTAGCTTACGTGACCCAAGAAGACACGATGCTGGGAACACTAACAGTGAGAGAGACGATATATTACTCAGCGAATCTAAGGCTTCCAGGGAGCATGAGGAAAGAAGAGGTGAAAGAGATAATAGAGGGGACGATTAGGGAAATGGGTCTGGAAGAATGTGCAGATCGAGTAATAGGGAATTGGCACTTGAGAGGGATAAGCGGTGGAGAGAAGAGAAGGCTAAGCATAGCACTTGAAATCCTCACAAGGCCTACCCTCTTGTTCCTTGATGAACCCACCACTGGTCTCGACAGTGCCTCAGCTTATTTTGTTGCCCAAACTCTCAGAAATTTGGCTCATGATGCCAAGACTGTTATCTCTTCCATACACCAACCAAGTAGTGAGGTTTTTGCACTCTTTGACCATCTCTTTCTTCTTTCTGGGGGTCAAACAATATACTTTGGCCCTGCACACAGGGCAAATCAGTTCTTTGCCAATGCGGGATTCCCGTGTCCAAGTCGAAGAAACCCTTCTGATCATTTCCTCCGTTGTATCAATTCAGATTTCGACGCTGTCACAACCACAACCACCGCCTCCCAAACAATACAAGAAGAAATATCATTATCAACTGCAGCAATCAAAGCAACACTCATAGAAAAATACCGATGGTCTGAGTATGCAACCACTGCAAGGGAAAAAATCAAGGAAATAGCAAACATAGAAGGACATGATTTTGAAAGTAAAAGCAAATGCGAAGCCAAATGGTGGAAGGAACTATCAATGCTGACTCAGAGATCTTGCGTGAACATGTCCAGAGATTTGGGATACTACTGGATAAGGATAACTACCTATGTTGCCTTATCTTTGTGTGTTGGAACAATATTTCATGATGTTGGAACGAGTTATAGAGCCATTTTTGCGAGAGGATCATGTGCTGGTTTTATCTCAGGCTTCATGACATTCATGTCCATTGGGAGCTTCCCTTCTTTCTTAGAAGAAATGAAGGTCTTCTACAAAGAAAGAAGGAATGGTTATTATGGCGTTGGAGTCTACATTCTCTCAAATTTTCTGTCTTCCTTTCCGTTTTTGGCATCGATGTCCATTGCTACGGGGGCAATAACCAATTATATGGTAAAGTCTCGTTCAGAATTTTCACACTTTGTGTATGTCACTCTGGATCTTATGGGCTGCATTGCGGTTGTGGAGAGCTCGATGATGGTTATAGCTTCACTGGTTCCTAACTTCCTTATGGGATTGACAATTGGAGCGGGATATATTGGTCTTATGATGATGACTTCTGGCTTTTTCCGTCCAATCCCTGATCTTCCCAAATTCTTCTGGCGTTACCCAATATCATATATCAATTACGGTGCATGGGGATTACAGATTCAAGTTGACAATTCAAAGTGGTGGGACTTAGCTGCAATCATGATCATCCTCATATTGCTTAGAGTTCTTTTCTTTTTCATTCTCAAATTTAAGGAGAGAGCTGCACCTTTTCTTTATAGCATCTACGCCAGGCAAACTCTGCAACGTATCAAGAAGCGACCTTCGTTCAGGAAAGGACCATCTTTCCCTTCCAAGCGGCACCAATCACTGCATCCATTGTCTCCTCAAGAGGATCTCAACTCGCTTATTCATTAG 3882 0.4253 MEIESASAKQKGVSECGDERMRVSEKRGMYLVWEDLTVVVPNFGNGHTKRLLNGLSGYAEPNKIMAIMGPSGSGKSTLLDALAGRLSRNVIMSGNVFLNGKKRRLEYGGVAYVTQEDTMLGTLTVRETIYYSANLRLPGSMRKEEVKEIIEGTIREMGLEECADRVIGNWHLRGISGGEKRRLSIALEILTRPTLLFLDEPTTGLDSASAYFVAQTLRNLAHDAKTVISSIHQPSSEVFALFDHLFLLSGGQTIYFGPAHKATQFFAKAGFPCPSRRNPSDHFLRCINSDFDAVTTATTTSQTIQEGISLSTAETKAILVEKYRWSEHATTARARIKEISSIEGHDFERKSECEAKWWKQLSMLTKRSFVNMSRDVGYYWIRITIYIALSLCVGTIFYEVGSSYRAIFARGACGAFISGFMTFMSIGGFPSFIEEMKVFNKERLNGYYGVGVYILSNFLSSFPFVTVMSIATGTITYYMVKFRSEFSHYVYICLDLIGCIAVVESSMMIIASLVPNFLMGLIIGAGYIGVMMMTAGYFRRIPDLPKFFWRYPISYINYGAWGLQGAYKNDMIGMEFEPLEPGAPKLKGEFILKSVLGIEIDNSKWWDLGAVMMILIMLRVLFFFILKFKEKVGPLFYSIYARQTLQRIKKRPSFRKGPSFPSKRHQSLHPLGMYLVWEHLTVVVPNFGNGHTKRLLNGLSGYAEPNKIMAIMGPSGSGKSTLLDALAGRLSRNVIMSGNVFLNGKKRRLEYGGVAYVTQEDTMLGTLTVRETIYYSANLRLPGSMRKEEVKEIIEGTIREMGLEECADRVIGNWHLRGISGGEKRRLSIALEILTRPTLLFLDEPTTGLDSASAYFVAQTLRNLAHDAKTVISSIHQPSSEVFALFDHLFLLSGGQTIYFGPAHRANQFFANAGFPCPSRRNPSDHFLRCINSDFDAVTTTTTASQTIQEEISLSTAAIKATLIEKYRWSEYATTAREKIKEIANIEGHDFESKSKCEAKWWKELSMLTQRSCVNMSRDLGYYWIRITTYVALSLCVGTIFHDVGTSYRAIFARGSCAGFISGFMTFMSIGSFPSFLEEMKVFYKERRNGYYGVGVYILSNFLSSFPFLASMSIATGAITNYMVKSRSEFSHFVYVTLDLMGCIAVVESSMMVIASLVPNFLMGLTIGAGYIGLMMMTSGFFRPIPDLPKFFWRYPISYINYGAWGLQIQVDNSKWWDLAAIMIILILLRVLFFFILKFKERAAPFLYSIYARQTLQRIKKRPSFRKGPSFPSKRHQSLHPLSPQEDLNSLIH* 1294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu11g00965 1293 Pfam ABC-2 type transporter 1005 1209 IPR013525 GO:0016020|GO:0140359
Lapu11g00965 1293 Pfam ABC-2 type transporter 360 569 IPR013525 GO:0016020|GO:0140359
Lapu11g00965 1293 Pfam ABC transporter 52 202 IPR003439 GO:0005524
Lapu11g00965 1293 Gene3D - 18 270 IPR027417 -
Lapu11g00965 1293 Gene3D - 669 914 IPR027417 -
Lapu11g00965 1293 SMART AAA_5 61 251 IPR003593 GO:0016887
Lapu11g00965 1293 SMART AAA_5 705 895 IPR003593 GO:0016887
Lapu11g00965 1293 MobiDBLite consensus disorder prediction 1276 1293 - -
Lapu11g00965 1293 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 675 910 IPR027417 -
Lapu11g00965 1293 FunFam ABC transporter G family member 11 669 913 - -
Lapu11g00965 1293 CDD ABCG_EPDR 28 257 - -
Lapu11g00965 1293 ProSitePatterns ABC transporters family signature. 819 833 IPR017871 GO:0005524|GO:0016887
Lapu11g00965 1293 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 675 919 IPR003439 GO:0005524
Lapu11g00965 1293 CDD ABCG_EPDR 672 901 - -
Lapu11g00965 1293 PANTHER ABC TRANSPORTER G FAMILY MEMBER 11 672 1213 - -
Lapu11g00965 1293 Pfam ABC-2 type transporter 232 304 IPR043926 GO:0140359
Lapu11g00965 1293 MobiDBLite consensus disorder prediction 1262 1293 - -
Lapu11g00965 1293 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 31 275 IPR003439 GO:0005524
Lapu11g00965 1293 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 31 267 IPR027417 -
Lapu11g00965 1293 ProSitePatterns ABC transporters family signature. 175 189 IPR017871 GO:0005524|GO:0016887
Lapu11g00965 1293 FunFam ABC transporter G family member 11 25 269 - -
Lapu11g00965 1293 Pfam ABC transporter 696 846 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu11g00965 Lapu-Chr11 12113959 12129745 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu11g00965 694 890 Calmodulin-binding Proteins AT2G36910 28.440 3.95e-11 65.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu11g00965 K05681 - gmx:100788651 1162.13