Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu11g00964 ATGGAGATTGAGGCAGCAGCCACCGATCGCAACAAAGGCTTCAGCTGGGGTGCTGCTACTGAGACTGAGAGGGATGTGCCATACACTGGCTTTGACAGAGGAAGCTTCTTGGCTTGGCAAGATCTCAGAGTGGTGCTACCTAACTTTGGAAAGGGACCAACCAAGAGGTTGCTTAATGGCCTCAATGGCTATGCTGAGCCTGGCAGAATCATGGCTATTATGGGTCCTTCTGGCTCTGGAAAATCTACCCTTCTTGATGCACTTGCAGGTAGACTCTCAAAAAATGTGGTTATGACAGGAAATGTTCTTCTAAATGGGAAGAAAAAAGGACTAGGTTACGGCGGTGTTGTAGCTTACGTAACTCAAGAGGATGTGCTGCTGGGAACTCTTACTGTGAAGGAAACCGTTTCCTTCTCGGCCCATCTACGACTTCCAACATCAATGAGCAAAGAAGAAGTTAACAGCATCATCGATGGAACAATCATAGAAATGGGTCTCCAAGATTGTGCTGATAGGTTGATTGGTAACTGGCACTTGAGAGGTATAAGTGGAGGGGAGAAGAAGAGGCTTAGCATTGCACTTGAGATTCTTACAATGCCTCGCTTACTGTTCCTTGATGAACCCACCAGTGGCCTTGACAGTGCCTCAGCATTTTTTGTTGTTCAAACTCTCAGAAATGTTGCTCGTGATGGAAGAACTGTTATCTCTTCCATTCACCAGCCCAGCAGTGAAGTCTTTGCACTCTTTGACGACCTTTTCTTGCTCTCTGGCGGTGAAACAGTTTATTTTGGAGAAGCAAAATCGGCAATTGAGGTCTCTCTAATATTTTTTGCTGAAGCTGGTTTCCCTTGTCCACGTAAAAGAAATCCTTCTGATCACTTCCTACGATGCATCAATTCTGATTTTGACGTTGTTACAGCTACGCTGAAGGGATCTCAGAGAATTCATGATGTTCCAAATTCAGCAGATCCTTTCATGAATTTGGCTACAGCAGAGATTAAGGCAATGCTAGTTGAGAAATATAGGCGTTCAACATATGCCAGAAGGGCAAAGAACAGAATTCAAGAACTATCTACAGATGAAGGGCTTCAACCTCCGACACAACATGGAAGTCAAGCTAGTTGGTGGAAGCAACTTTCAACTTTGACAAAGAGATCATTTGTGAACATGTGCAGAGATGTGGGGTACTACTGGTTGAGGATCATAATTTACATCATTGTATCCATATGTGTGGGAACCGTTTATTTTGACATTGGCTATAGCTACACTTCCATCCTGGCACGTGGTGCCTGTGGTGCATTCATATCAGGATTTATGACATTCATGTCAATTGGGGGCTTTCCATCATTTATTGAAGAAATGAAGGTATTTTATCGAGAAAGGCTTAATGGATACTATGGAGTTGCAGCATATATTTTAGCCAACTTCCTTTCTTCTTTCCCGTTCCTGGTTGCTATTGCTCTTACTAGTAGCACCATCACCTATAACATGGTGAAATTCAGGCCAGGGATCAGTCACTTTGTGTTTTTCACTATCAACATCTACAGCTGCATTTCCGTAATAGAGAGCCTCATGATGGTTGTGGCTTCACTTGTTCCAAATTTCCTCATGGGAATAATTACAGGGGCTGGAATAATAGGAATCATGATGATGACCTCCGGATTCTTCAGGTTGCTGTCTGATCTTCCAAAGCCAGTTTGGCGCTACCCAATCTCATATATCAGTTATGGTTCATGGGCAATACAGGGTTCCTACAAGAATGACTTGCTTGGGCTTGAGTTTGAACCTCTGATACCTGGTGACTCAAAATTGACTGGAGAATACGTGATCACACACATGTTAGGCATTGAGTTAAACCATTCAAAGTGGTGGGACTTAGCAGCTCTATTTGTGATTCTCATAGGTTACAGACTTCTGTTCTTCACTGTTCTCAAGTTGAAGGAGAGAGCTTCACCATTGTTTCAGACACTTTATGCCAAGCGAACCATCCAACAGCTTGAAAAGAGACCCTCTTTCAGGAAGATGCCATCTTTCCCTTCCCAGAGGCATCAACCCCTCCATTCACTTTCTTCTCAAGATGGTCTTGATTCTCCACTCAACTAA 2103 0.4346 MEIEAAATDRNKGFSWGAATETERDVPYTGFDRGSFLAWQDLRVVLPNFGKGPTKRLLNGLNGYAEPGRIMAIMGPSGSGKSTLLDALAGRLSKNVVMTGNVLLNGKKKGLGYGGVVAYVTQEDVLLGTLTVKETVSFSAHLRLPTSMSKEEVNSIIDGTIIEMGLQDCADRLIGNWHLRGISGGEKKRLSIALEILTMPRLLFLDEPTSGLDSASAFFVVQTLRNVARDGRTVISSIHQPSSEVFALFDDLFLLSGGETVYFGEAKSAIEVSLIFFAEAGFPCPRKRNPSDHFLRCINSDFDVVTATLKGSQRIHDVPNSADPFMNLATAEIKAMLVEKYRRSTYARRAKNRIQELSTDEGLQPPTQHGSQASWWKQLSTLTKRSFVNMCRDVGYYWLRIIIYIIVSICVGTVYFDIGYSYTSILARGACGAFISGFMTFMSIGGFPSFIEEMKVFYRERLNGYYGVAAYILANFLSSFPFLVAIALTSSTITYNMVKFRPGISHFVFFTINIYSCISVIESLMMVVASLVPNFLMGIITGAGIIGIMMMTSGFFRLLSDLPKPVWRYPISYISYGSWAIQGSYKNDLLGLEFEPLIPGDSKLTGEYVITHMLGIELNHSKWWDLAALFVILIGYRLLFFTVLKLKERASPLFQTLYAKRTIQQLEKRPSFRKMPSFPSQRHQPLHSLSSQDGLDSPLN* 701
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu11g00964 700 SMART AAA_5 67 239 IPR003593 GO:0016887
Lapu11g00964 700 Gene3D - 38 275 IPR027417 -
Lapu11g00964 700 FunFam ABC transporter G family member 11 31 280 - -
Lapu11g00964 700 ProSitePatterns ABC transporters family signature. 182 196 IPR017871 GO:0005524|GO:0016887
Lapu11g00964 700 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 53 269 IPR027417 -
Lapu11g00964 700 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 37 282 IPR003439 GO:0005524
Lapu11g00964 700 MobiDBLite consensus disorder prediction 677 700 - -
Lapu11g00964 700 MobiDBLite consensus disorder prediction 668 700 - -
Lapu11g00964 700 Pfam ABC transporter 58 210 IPR003439 GO:0005524
Lapu11g00964 700 Pfam ABC-2 type transporter 239 300 IPR043926 GO:0140359
Lapu11g00964 700 Pfam ABC-2 type transporter 378 587 IPR013525 GO:0016020|GO:0140359
Lapu11g00964 700 CDD ABCG_EPDR 34 264 - -
Lapu11g00964 700 PANTHER ABC TRANSPORTER G FAMILY MEMBER 11 32 669 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu11g00964 Lapu-Chr11 12098971 12105768 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu11g00964 20 251 Calmodulin-binding Proteins AT2G36910 27.686 5.34e-11 64.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu11g00964 K05681 - gmx:100777598 1255.74