Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu11g00949 ATGCCTTCCTCTGTTGCTGACCTGATGTGGCAACAAGAAGGGTCGTCTTCTGTAACTTCTTCACCCCTGCAGCTCTTCTCCATGATGTCACTTTCACCTAGCTTAGGTTCTCCCAGCAATCTCTTGCTCAGAGAAATGAAATCCGAGGAAAGGGGTTTGTACTTGATCCATTTGTTGCTCACTTGTGCAAATCATGTAGCTGCTGGTAACCTTGAAAATGCAAATGCCACACTTGAGCAAATTTCCCTGCTTGCTTCCCCTGACGGGGATACGATGCAGCGAATCGCGGCGTATTTTATGGAATCACTCGCAGATCGGATTCTGAAAACATGGCCTGGGATCCACAGAGCCCTCAACTCAACTAGAGTGACTATGCTATCTGACGAAATTCTTGTTCAGAAGCTCTTCTTTGAGCTCTTCCCTTTCTTGAAGGTGGCATATGTTCTCACAAATCAGGCCATCATCGAGGCCATGGAGGGGGAGAAAATGATTCACATAATTGATCTCAATGCTGCTGAAGCTGCTCAGTGGATTGCCCTCCTACAAGTTTTGAGTGCGCGTCCCGAAGGCCCTCCACATTTGAGAATCACTGGGATTCATCAGAAAAAGGAGATTCTGGATCAGGTAGCTCATAGACTGACTGAAGAAGCAGAAAAGTTGGATATACCATTCCAATTCAACCCCGTAGTCAGCAAACTAGAAAATCTTGATTTTGACAAACTTCGTGTGAAAACTGGGGAGGCACTAGCAATAGGTTCCATACTCCAATTACATTCCCTTTTGGCCTGGGATGATGAAGCCTTGCGGAGAAAATCTCCTCGTCTGTTAAAAGGCTCAAATGGAATTCACTTGCAAAGAGTCTTGCCACTGAGCCAAAGCACATTGGGTGATATGCTCGAGAAAGATATGGTCAATGGGTACACCCCAAGTCCTGACTCAACCTCATCATCACCAGCATCTTTAACTGCTTCCAATTCACTGAATATGGAGAGCTTTCTTAATGCCTTATGGGGTTTATCACCGAAGGTCATGGTTGTGACAGAGCAAGACTGTAACCATAATGGTCCAAGTCTGATGGATAGGCTACTTGAAGCACTATATTCTTATGCAGCATTGTTTGATTGTTTGGAATCCACTGTCTCGAGAACATCATTAGAGAGATTAAGGGTGGAGAAGATGATTTTTGGGGAGGAAATAAAGAACATCATCGCATGTGAGGGGCCTGAACGAAAGGAGAGACATGAAAAGCTTGACAAATGGTTCCAGAGATTTGATCAAGCTGGGTTCGGTAATGTGCCTTTGAGCTACTATGGCATGTTGCAAGCAAGGAGGTTCATCCAGAGCTATGGTTGTGAAGGATATAGAATGAGGGATGAAAATGGTTGTGTTTTAATTTGTTGGCAGGATCGGCCAATGTTTTCAATATCAGCTTGGAGATCTAGGAAGTAA 1449 0.4451 MPSSVADLMWQQEGSSSVTSSPLQLFSMMSLSPSLGSPSNLLLREMKSEERGLYLIHLLLTCANHVAAGNLENANATLEQISLLASPDGDTMQRIAAYFMESLADRILKTWPGIHRALNSTRVTMLSDEILVQKLFFELFPFLKVAYVLTNQAIIEAMEGEKMIHIIDLNAAEAAQWIALLQVLSARPEGPPHLRITGIHQKKEILDQVAHRLTEEAEKLDIPFQFNPVVSKLENLDFDKLRVKTGEALAIGSILQLHSLLAWDDEALRRKSPRLLKGSNGIHLQRVLPLSQSTLGDMLEKDMVNGYTPSPDSTSSSPASLTASNSLNMESFLNALWGLSPKVMVVTEQDCNHNGPSLMDRLLEALYSYAALFDCLESTVSRTSLERLRVEKMIFGEEIKNIIACEGPERKERHEKLDKWFQRFDQAGFGNVPLSYYGMLQARRFIQSYGCEGYRMRDENGCVLICWQDRPMFSISAWRSRK* 483
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu11g00949 482 MobiDBLite consensus disorder prediction 302 321 - -
Lapu11g00949 482 Pfam GRAS domain family 55 479 IPR005202 -
Lapu11g00949 482 MobiDBLite consensus disorder prediction 307 321 - -
Lapu11g00949 482 ProSiteProfiles GRAS family profile. 46 479 IPR005202 -
Lapu11g00949 482 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 47 478 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu11g00949 Lapu-Chr11 11956185 11958672 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu11g00949 9 482 GRAS Transcription Factor Family AT1G50420 65.010 0.0 647
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Lapu11g00949 GRAS 9e-138 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu11g00949 - - gmx:100814131 832.787