Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu11g00944 ATGCTTCAAAGCTTGGTCCCGCGATCACCCCGCACTTCCAACCCTAACGACATGAAAACCAAGCGCGCCGTTGACGCCGCTGATTCCCCCGCCGATCAGCCTTCTTTCAAGCGGACCAACTTCTCCGCCGATAAAGCCACCGAGGAGGACCAGTCCTTCGATCCTGAACCTCACGCCCGTGAGTCCACTGGCCTCAAACTCCTTGGCCTCCTCCTCCAATGCGCCGAGTGCGTCGCCATGGATAAACTCGACTTTGCCAACGACCTCCTCCCAGAGATCGCCGAACTCTCGTCGCCGTTCGGCACCTCCCCGGAGCGCGTCGGAGCGTACTTCGCGCAGGCGCTTCAGGCGCGTGTGGTCAGCTCCTGCCTCGGCTCCTACTCCCCGCTGACCGCCAAATCGGTAACCCTAACTCAGTCGCAGCGAATCTTCAACGCCTTCCAATCCTACAACTCGGTCTCGCCGCTGGTGAAGTTCTCTCACTTCACCGCCAACCAGGCTATCTTCCAGGCCCTGGAAGGCGAGGATCGCGTCCATATCATCGACCTCGATATCATGCAAGGTCTCCAATGGCCGGGGTTGTTCCACATCCTCGCCTCTCGCTCGAAGAAGATCCGCTCCATGAGAATCACCGGATTCGGATCCTCCTCGGAGCTCCTCGACTCCACTGGCCGGAGACTGGCGGATTTCGCGAGCTCTCTCGGGCTTCCGTTCGAGTTTCACCCGGTGGAGGGGAAAATCGGAAGCGTGACGGAACTGAGTCAACTGGGCGTTCGAGCTAACGAGGCGACCGTGGTGCACTGGATGCATCATTGCTTGTATGACATAACTGGGAGCGATTTAGGGACGTTGAGATTGCTGACTCAGCTTAGGCCGAAACTGATCACGACCGTCGAGCAGGATCTAAGCCACGCCGGTAGCTTCCTGGCGCGGTTCGTGGAGGCCTTGCATTATTACAGCGCGTTGTTCGACGCGCTTGGGGATGGTTTGGGTGCGGACAGCCTGGAGAGGCACACGGTGGAGCAGCAGCTTTTGGGCTGCGAGATCAGGAACATCGTGGCCGTGGGCGGGCCCAAGAGGACCGGAGAAGTTAAGGTGGAGCGGTGGGCGGAGGAGTTGAAACGGGCCGGGTTTCGACCCGTTTCCCTCCGGGGCAACCCTGCCGCACAAGCGAGTTTGTTGCTTGGAATGTTCCCTTGGAGAGGTTACACGCTTGTTGAAGAGAATGGTTCCTTGAAGCTTGGTTGGAAGGATCTCTCTCTTTTGATTGCCTCTGCTTGGCAACCCTCTGATTTGATTGCTTACCCTGATTGA 1314 0.5845 MLQSLVPRSPRTSNPNDMKTKRAVDAADSPADQPSFKRTNFSADKATEEDQSFDPEPHARESTGLKLLGLLLQCAECVAMDKLDFANDLLPEIAELSSPFGTSPERVGAYFAQALQARVVSSCLGSYSPLTAKSVTLTQSQRIFNAFQSYNSVSPLVKFSHFTANQAIFQALEGEDRVHIIDLDIMQGLQWPGLFHILASRSKKIRSMRITGFGSSSELLDSTGRRLADFASSLGLPFEFHPVEGKIGSVTELSQLGVRANEATVVHWMHHCLYDITGSDLGTLRLLTQLRPKLITTVEQDLSHAGSFLARFVEALHYYSALFDALGDGLGADSLERHTVEQQLLGCEIRNIVAVGGPKRTGEVKVERWAEELKRAGFRPVSLRGNPAAQASLLLGMFPWRGYTLVEENGSLKLGWKDLSLLIASAWQPSDLIAYPD* 438
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu11g00944 437 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 52 423 IPR005202 -
Lapu11g00944 437 Pfam GRAS domain family 69 428 IPR005202 -
Lapu11g00944 437 MobiDBLite consensus disorder prediction 42 59 - -
Lapu11g00944 437 MobiDBLite consensus disorder prediction 1 59 - -
Lapu11g00944 437 MobiDBLite consensus disorder prediction 1 19 - -
Lapu11g00944 437 ProSiteProfiles GRAS family profile. 58 428 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu11g00944 Lapu-Chr11 11901596 11904014 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu11g00944 18 431 GRAS Transcription Factor Family AT5G41920 66.348 0.0 535
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Lapu11g00944 GRAS 5.3e-114 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu11g00944 - - gmx:100816249 803.127