Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu11g00943 ATGGCCACCATGGAAGACATGAACATGACTGGGGAAATTGCACTTCCTGGCTTCCGATTCCACCCAACAGAGGAAGAGCTTCTCGATTTCTATCTTAAAAACATGGTTGTCGGCAAGAAACTCCGTTACGACGTTATTGGTTTCCTCAACATCTATCACCATGATCCTTGGGACTTGCCCGGTTTGGCTAAGGTCGGGGAGAGAGAATGGTACTTCTTCGTGCCGAGGGACAAAAAGCACGGAAGCGGCGGAAGGCCGAACCGGACCACCGAAAAAGGGTTTTGGAAAGCGACCGGTTCAGACCGCAAAATAGTGACTTTGTCTGATCCCAAACGCATAATCGGTTTGAGGAAAACCCTGGTTTTCTATCTGGGAAGAGCTCCCAGTGGACGCAAAACCGATTGGGTCATGAACGAGTACCGTTTACCTGACAATTGCAAATTACCCAAGGAAATAGTGTTGTGCAAGATATATCGAAAGGCAACTTCGTTGAAAGTGCTGGAGGAAAGGGCAGAGAGAGAGATGAAGCAAATGGTTGGTTCCCCTGCTTCTCCTCCTTCGTCCACGGACACCATGTCCTTTAGCAGCCCACAGGAGGAGCAAAATGTGGCCTTGCCTCTGCCATTGTTGCAGCATGTTCTTAAGAAAGAGTCTGAATCTGAAGAGTTGGCATGTGTGTCTAACATGACAGTGCCTAAACAAGAAAAAACAAGCAACCAAATGGGTTTGAAAGACAACAAAGGGACCTGTGGAACATCATCACTACAAATGCCCTTTGGGAAGGATAAGCTTCCAGATCTTCAGCTTCCCATGCTAACAGATTGGACCCAAGATACCTTTTGGGCTCAGTTGAATAGTCCATGGCTCCAAAACTTTACTCCCACCAACATCTTAAACTTCTACTGA 906 0.4713 MATMEDMNMTGEIALPGFRFHPTEEELLDFYLKNMVVGKKLRYDVIGFLNIYHHDPWDLPGLAKVGEREWYFFVPRDKKHGSGGRPNRTTEKGFWKATGSDRKIVTLSDPKRIIGLRKTLVFYLGRAPSGRKTDWVMNEYRLPDNCKLPKEIVLCKIYRKATSLKVLEERAEREMKQMVGSPASPPSSTDTMSFSSPQEEQNVALPLPLLQHVLKKESESEELACVSNMTVPKQEKTSNQMGLKDNKGTCGTSSLQMPFGKDKLPDLQLPMLTDWTQDTFWAQLNSPWLQNFTPTNILNFY* 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu11g00943 301 Pfam No apical meristem (NAM) protein 16 142 IPR003441 GO:0003677|GO:0006355
Lapu11g00943 301 MobiDBLite consensus disorder prediction 176 195 - -
Lapu11g00943 301 SUPERFAMILY NAC domain 7 160 IPR036093 GO:0003677|GO:0006355
Lapu11g00943 301 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 13 220 - -
Lapu11g00943 301 ProSiteProfiles NAC domain profile. 14 160 IPR003441 GO:0003677|GO:0006355
Lapu11g00943 301 MobiDBLite consensus disorder prediction 181 195 - -
Lapu11g00943 301 Gene3D NAC domain 23 164 IPR036093 GO:0003677|GO:0006355
Lapu11g00943 301 FunFam NAC domain-containing protein 67-like 23 164 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu11g00943 Lapu-Chr11 11894758 11896771 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu11g00943 9 301 NAC Transcription Factor Family AT2G17040 58.983 8.30e-118 338
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lapu11g00943 NAM 1.3e-33 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu11g00943 - - gmx:100816770 538.495