Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu11g00940 ATGGCTTGGAAGTGGCAGAAAGAGGCCTCGAATTACCAGAGGAAGAGAATCCTTTGGGCAAAGACTGAAGAAAATGCGGGAAGAGCAGAAGGTTGCAGCGTGTGGACGAAGGCTGAAAAGGGTCACTTTGTTGTGTACAGCATGGATAAGAAGCGCTTCGTGCTTCCCTTGAAGTATTTGAAAAACAACATTTTCAGAGAGCTTTTCAAGTTGGCAGAAGAAGAGTTTGGTCTTTCTAGCAACGTGCCTCTAACGTTGCCTTGTGAAGCGACGTTAATAGAGTACGTGATAACGTTGATCGAGAGAAACGTAACTAAGGATCTGGAAGAAGCTGTGTTAATGTTCATAGCTACTAGTCGATGCCAATCCTCCTTTGATCTTCATCGTCAACGAACCAATCAACATTTGCTTTGCAGCTACTGA 423 0.4421 MAWKWQKEASNYQRKRILWAKTEENAGRAEGCSVWTKAEKGHFVVYSMDKKRFVLPLKYLKNNIFRELFKLAEEEFGLSSNVPLTLPCEATLIEYVITLIERNVTKDLEEAVLMFIATSRCQSSFDLHRQRTNQHLLCSY* 141
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu11g00940 140 PANTHER AUXIN-RESPONSIVE FAMILY PROTEIN 1 133 IPR003676 GO:0009733
Lapu11g00940 140 Pfam Auxin responsive protein 10 100 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu11g00940 Lapu-Chr11 11868765 11871344 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu11g00940 40 108 Calmodulin-binding Proteins AT5G20810 40.000 4.66e-11 56.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu11g00940 - - gmx:100803097 221.861