Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu11g00909 ATGGCACTCATCGTTGTCATTTTATTGTTTTCCTTCCTCTTCAACACTCACGTGGAAGCCGAATATGCTGAGAAAGACGAGGAGTGGAAGCAAAAGTATGATCGAGTGAATAAATTGCCGGGGCAACCAGAAGTGAATTTTAATCACTATGCTGGTTATGTGAAATTAAGACCATACGAAGAGAAGGCGTTATTTTATTGGTTCTTTGAAGCTCAGGATTCTCCAAGGGACAAACCTCTTGTTCTTTGGCTCAACGGAGGACCTGGTTGCTCGTCTGTTGCCTTTGGAGCAGCACAAGAAATTGGTCCATTTCTGGTAGATGAGCAACAGAACCTCAAATTTAACAATTTCTCTTGGAATAGAGTCGCAAACATCATATTCTTGGAGTCACCAATTGGTGTTGGCTTTTCTTATACTAACAATTCCAAGGACTTAAGTGAGCTTGGTGATAAAGTTTCTGCTTCCGATAACTATGCTTTTCTGATTGGTTGGTTCAGAAGGTTCCCCAACTTCAGGTCAAGCGAATTCTATATTGTAGGAGAGAGTTATGGAGGACATTATGCTCCACAACTTGCTGACCTTATCCTTGAAGGAAACAAAAAGGGTCCTTACATCAATTTGAAGGGCTTCATGATGGGAAATGCTGTAATAAACGATATTACAGATTTGAAGGGCATATTCGATTATGCTTTGAGCCATGCAATAATCTCAAAGCAAGTATACGATGGGATAATAAAATACTGTGATTTCAGTAAAGAGACACAAAGAACAGATTGCGAACTGTATATAGCCAAGTTCTTAAAGGCTTACTCTGATATTGATATATTCAGCATCTATTCACCAATTTGTCTCGACGATTCTGAAAAACCAGTTTCAACGAAACTTATTGTTGCTCCTCATGCTCTCACACAACATGATGTTTGGAATGCAGTGCCATCATCAGGATACGATCCTTGTCCAGATGATCATGTAAGAAAATATTTCGATAAGAAGGATGTTCAGAGGGCCATCCATGCAAATGTCACTAACTTGACTTATCCCTATACCCTTTGCAGCTCTTTGATTAAAAAATGGAATGATTCACCAACCACAGTGCTGCCACTGATTCAGAAGCTCTTACGTGTGGGTTTACGCATTTGGATATACAGTGGAGACACAGATGGTAGAGTTCCAGTACTGTCAACAAGATACAGCGTGGAGGAGATGAAACTAAATATCACAAAAGAGTGGAGAGCTTGGTTCGAGGGAGGAGAAGTGGGAGGGTGGGTGGAGGAATACGAAGGTGGTCTTACTTTTGCCTCCATTAGAGCTCTTGAATACTCTGCCCATGCTCTTCATCTCATCTCTCAACCCTTCATTTTGAATCTCCTACTTTCAAATCTGAGAAACACAATTTTTAGGGCAGATTTTCGAGCTTCTGCACGATGTCGTACCCGCAACTTCGCGCTTTCTTCTTTATCATCGGAATTTGCTTAA 1476 0.4079 MALIVVILLFSFLFNTHVEAEYAEKDEEWKQKYDRVNKLPGQPEVNFNHYAGYVKLRPYEEKALFYWFFEAQDSPRDKPLVLWLNGGPGCSSVAFGAAQEIGPFLVDEQQNLKFNNFSWNRVANIIFLESPIGVGFSYTNNSKDLSELGDKVSASDNYAFLIGWFRRFPNFRSSEFYIVGESYGGHYAPQLADLILEGNKKGPYINLKGFMMGNAVINDITDLKGIFDYALSHAIISKQVYDGIIKYCDFSKETQRTDCELYIAKFLKAYSDIDIFSIYSPICLDDSEKPVSTKLIVAPHALTQHDVWNAVPSSGYDPCPDDHVRKYFDKKDVQRAIHANVTNLTYPYTLCSSLIKKWNDSPTTVLPLIQKLLRVGLRIWIYSGDTDGRVPVLSTRYSVEEMKLNITKEWRAWFEGGEVGGWVEEYEGGLTFASIRALEYSAHALHLISQPFILNLLLSNLRNTIFRADFRASARCRTRNFALSSLSSEFA* 492
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu11g00909 491 Gene3D - 365 450 - -
Lapu11g00909 491 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 35 440 IPR001563 GO:0004185|GO:0006508
Lapu11g00909 491 SUPERFAMILY alpha/beta-Hydrolases 34 437 IPR029058 -
Lapu11g00909 491 Pfam Serine carboxypeptidase 40 436 IPR001563 GO:0004185|GO:0006508
Lapu11g00909 491 Gene3D alpha/beta hydrolase 31 284 IPR029058 -
Lapu11g00909 491 FunFam Carboxypeptidase 30 285 - -
Lapu11g00909 491 ProSitePatterns Serine carboxypeptidases, serine active site. 178 185 IPR018202 GO:0004185
Lapu11g00909 491 PRINTS Carboxypeptidase C serine protease (S10) family signature 128 138 IPR001563 GO:0004185|GO:0006508
Lapu11g00909 491 PRINTS Carboxypeptidase C serine protease (S10) family signature 115 127 IPR001563 GO:0004185|GO:0006508
Lapu11g00909 491 PRINTS Carboxypeptidase C serine protease (S10) family signature 164 189 IPR001563 GO:0004185|GO:0006508
Lapu11g00909 491 Gene3D - 319 356 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu11g00909 Lapu-Chr11 11670517 11675898 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu11g00909 321 442 Calmodulin-binding Proteins AT2G22960 27.419 4.39e-07 48.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu11g00909 K16297 - gmx:100799746 651.744