Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu11g00893 ATGATTTGGAGCAGATGCTGGGAGATGAGATTGGGAAAGGAGCTTATGGTCGAGTTTACAAAGGTTTGGACCTGGAGAATGGTGATTTTGTTGCCATTAAACAAGTTTCTTTGGAGAATATTGCTCAGGAGGATCTCAACATCATCATGTTCGTGCATGAGCAGAGGCAAGAAGATTTCAATGTGTTGCAGTGGCAGAGGCAGGCACACGGGTTGGCAAGAGATTGATTTGTTAAAGAATCTGAACCACAAAAACATTGTAAAGTATCTTGGATCTTCTAAGACAAAAAGTCACCTGCACATAGTTCTTGAGTACGTAGAGAATGGATCGCTTGCCAATATTATAAAGCCAAATAAATTTGGACCTTTTCCTGAATCGTTGGTTGCAGTATATATAGCCCAGGTGTTGGAAGGTTTAGTTTATCTTCATGAACAAGGTGTTATCCATCGGGATATTAAGGGTGCAAACATACTGACAACTAAAGAGGGTCTTGTGAAACTAGCTGATTTTGGTGTTGCTACAAAACTAACAGAGGCTGATGTTAACACTCATTCAGTTGTTGGAACACCTTACTGGATGGCCCCAGAGGTTATAGAAATGGCTGGGGTTTGTGCAGCTTCTGACATTTGGAGTGTTGGCTGTACAGTTATTGAACTTCTTACATGTGTACCTCCATATTATGATTTGCAGCCCATGCCAGCACTTTTCCGTATTGTCCAGGATGAGCACCCGCCAATTCCGGATAGCCTTTCACCTGATATTACTGATTTTCTGCTTCAATGCTTTAAGAAGGATTCTAGACAAAGGCCCGATGCTAAAACTCTGCTGTCTCACCCCTGGATTCAAAACTGTAGACGTGTTCTGCAGTCTTCTCTTCGTCATAGTGGAACACTAAGAAATATAGAGGAAGATGACTCTGCAGATGCAGAAGTTTCTGGTGGTTATCATAAGAGTGCTTACGAAGGGTCTTCTGTGGAGAAAGAGGACTCTACAAAAGAGCTTTCTTCTGCAGCTGCTCATGGCAGCAAATCTCATGAAGACAATGCTTCAGCTACTAATTTTCCCATTGAAAGAACAGAGAAAACAGATCATGTTCCATCAGATCAGGTTCTTACCTTAGCCATTCGTGAGAAGTCATTTCTGCAAACTGCTTCTAGCAAACTCTCTCCTAATAGAGAAGTTGGTAATTCTGAGCCTACTGGCAATCATGAAAATTCAAATGCTAAAGACCTTCATGAAGTTATGATGAATGGAGAAGTTGGGTCACCACAATCAAGAGCAATGGCTAGTAAGGTTGGAGGAAAAGACAGTTCTGCAAACAATGGTAACAAATCATTTGCTTTTGGGCCAAGAGGTCAAGATAATGGTTCCCTCAAGGCAATGAAGATGCCAACCACTGTGGAAGGAAATGAGCTGAGTAGATTTAGTGACCCACCAGGAGATGCCTACTTAGATGATTTATTCCATCCATTGGATAAACAACCTGGGGAGGTTGCAGCAGAGGCGTCCACATCTACATCCACTTCTCACATAGCTAAAGGTAACACATCTGCAATTGATGGTGGGAAAAATGACCTGGCTAAAGAGTTGAGGGCCACAATTGCTCGAAAGCAATGGGAGAAGGAAAGTGAAATTGGACAGGCAAACAATGGTGGGAATCTTTTGCATCGAGTGATGATAGGTGTTCTAAAAGATGATGTGATTGACATAGATGGTTTGGTCTTTGATGAAAAACTTCCTGGAGAGAACCTTTTTCCTTTGCAGGCTGTTGAGTTCAGCAAACTAGTTGGTTCATTAAAACCAGAGGAATCAGAAGATGTGATTGTGTCTGCATGTCAGAAACTTATTGGTATATTTAACCAACGCCCAGAGCAGAAGATTGTTTTTGTTACCCAGCATGGTTTACTTCCTCTAACAGATTTGCTAGAAGTTCCTAAAACACGTGTTATATGTTCTGTACTTCAGCTTATAAATCAAATAGTTAAAGACAACACTGATTTTCTAGAAAATGCATGTCTTGTTGGATTGATTCCTGCAGTCACAAGCTTTGCAGTACCTGATCGTCCCCGAGAGATTCGTATGGAAGCAGCTTATTTTTTACAGCAGCTTTGTCAGTCAAGTTCTTTGACATTACAAATGTTTATCGCTTGCCGCGGAATACCAGTTTTAGTGGGATTTCTTGAGGCCGATTATGCCAAGTACAGGACTATGGTCACGGAGATGGTTCATCTGGCTATTGATGGCATGTGGCAGGTATTTAAGCTTCAGCAGTCAACTCCTAGAAATGATTTTTGCCGGATAGCTGCTAAGAATGGAATACTTCTCAGGCTTATAAATACTCTTTATAGCTTAAATGAGTCAACTCGACTAGCTTCTAGCTCTGCTGGGGGTGGATTTTCAGTTGATGGTTCGGCTCAACGCCCACGATCTGGTATCTTGGATCCTACACACCCTTATATTAGTCAAAATGAAGCATTGATATCTTCAGTAGACCAGCAAGATCCCCCTAAAGTGAGACGTGGAGTACCTGATCATCATTTAGAACCTTCACATCCTTCATCCTCCAATCCTCGAAGATCAGATGCTAACTACTCTGTGGATGATGCTGTGTCACAGGAGAAGAATTCAACTCAAACTCCCAGAGAATCTTCTGTAGGTGCACTGAAAGAGCGAGAGAATATGGATCGTTGGAAAACTGATCCTTCTCGAGCAGATGTTGAATCCAGACAACGTATTTCTACCAACAGGACATCAACTGATAGGCCACCAAAATCAACAGAACCATCACCAAATGGGTTATCAGTAACAGGATCTACACATCAAGAACAAGTTAGGCCTCTTCTTAGTTTATTGGACAAAGAGCCGCCATCTGGACGCTTTTCTGGACAGCTTGAGTATGTACGTCAGTTCTCAGGATTAGAAAGACATGAAAGTGTACTCCCTTTGTTACATGCTTCTGAAAAGAAAACGAATGGTGAATTAGACTTTTTGATGGCAGAATTTGCAGATGTTTCTCAACGCGGAAGGGAAAACGGAAATCTTGACTCCAGTGCTAGAGTGTCTCATAAAGTAACTCCCAAGAAATTGGGGACTTTGAGTTCCAGTGAAGGGGCTGCTTCCACATCTGGAATCGCATCACAGACAGCATCAGGTGTCCTGTCTGGTTCAGGTGTTCTAAATGCTAGACCAGGTAGTGCTACTTCGTCTGGGATACTTTCCCACATGGTTTCATCACTGAATGCAGAAGTTGCCAGAGAATATCTGGAGAAAGTGGCAGATCTTCTGCTTGAGTTTGCGCAAGCAGACACAACAGTGAAATCTTACATGTGTAGCCAAAGCTTGCTCAGTCGTCTTTTCCAGATGTTTAACAGGGTGGAGCCTCCTATTTTGTTGAAGATACTGAAGTGTATTAATCATCTGTCAACTGATCCAAATTGCTTAGAAAATCTTCAGCGTGCTGAGGCAATAAAATACTTGATACCAAATCTTGAACTCAAAGAAGGGTCTCTTGTATCAGAGATACATCACGAGGTCTTGAATGCGCTATTCAATTTATGCAAGATAAATAAGAGAAGACAAGAACAAGCAGCTGAAAATGGAATCATTCCCCATTTAATGCTATTCATCACATCCAATTCTCCCTTGAAACAGTATGCTTTGCCTCTGCTATGTGACATGGCTCATGCATCTCGTAATTCAAGGGAGCAGTTAAGGGCTCATGGTGGTTTGGATGTGTATTTGAACCTTCTTGAGGATGAGCTTTGGTCTGTGACAGCATTAGACTCTATTGCTGTTTGTTTAGCCCACGACAATGATAATAGGAAGGTTGAACAAGCATTGCTGAAAAAGGATGCAGTTCAGAAGCTCGTGAAGTTCTTCCAGTGCTGTCCAGAGCGGCATTTCGTGCACATATTGGAGCCATTCCTGAAAATCATCACAAAATCTTCGAGGATTAATACCACACTGGCTGTCAATGGGTTAACGCCATTGCTCATTGCAAGGCTAGATCATCAGGATGCTATAGCTCGTCTTAATTTACTCAGGCTAATAAAGGCCGTTTATGAGCATCACCCTCAGCCGAAGAAGTTGATTGTGGAGAATGATCTACCTGAAAAGCTTCAAAACTTGATAGGGGAACGGAGAGATGGACAAGTCTTGGTTAAACAGATGGCCACCTCATTACTTAAAGCACTACACATAAACACCGTTTTGTAA 4215 0.4199 MIWSRCWEMRLGKELMVEFTKVWTWRMVILLPLNKFLWRILLRRISTSSCSCMSRGKKISMCCSGRGRHTGWQEIDLLKNLNHKNIVKYLGSSKTKSHLHIVLEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQGVIHRDIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPYWMAPEVIEMAGVCAASDIWSVGCTVIELLTCVPPYYDLQPMPALFRIVQDEHPPIPDSLSPDITDFLLQCFKKDSRQRPDAKTLLSHPWIQNCRRVLQSSLRHSGTLRNIEEDDSADAEVSGGYHKSAYEGSSVEKEDSTKELSSAAAHGSKSHEDNASATNFPIERTEKTDHVPSDQVLTLAIREKSFLQTASSKLSPNREVGNSEPTGNHENSNAKDLHEVMMNGEVGSPQSRAMASKVGGKDSSANNGNKSFAFGPRGQDNGSLKAMKMPTTVEGNELSRFSDPPGDAYLDDLFHPLDKQPGEVAAEASTSTSTSHIAKGNTSAIDGGKNDLAKELRATIARKQWEKESEIGQANNGGNLLHRVMIGVLKDDVIDIDGLVFDEKLPGENLFPLQAVEFSKLVGSLKPEESEDVIVSACQKLIGIFNQRPEQKIVFVTQHGLLPLTDLLEVPKTRVICSVLQLINQIVKDNTDFLENACLVGLIPAVTSFAVPDRPREIRMEAAYFLQQLCQSSSLTLQMFIACRGIPVLVGFLEADYAKYRTMVTEMVHLAIDGMWQVFKLQQSTPRNDFCRIAAKNGILLRLINTLYSLNESTRLASSSAGGGFSVDGSAQRPRSGILDPTHPYISQNEALISSVDQQDPPKVRRGVPDHHLEPSHPSSSNPRRSDANYSVDDAVSQEKNSTQTPRESSVGALKERENMDRWKTDPSRADVESRQRISTNRTSTDRPPKSTEPSPNGLSVTGSTHQEQVRPLLSLLDKEPPSGRFSGQLEYVRQFSGLERHESVLPLLHASEKKTNGELDFLMAEFADVSQRGRENGNLDSSARVSHKVTPKKLGTLSSSEGAASTSGIASQTASGVLSGSGVLNARPGSATSSGILSHMVSSLNAEVAREYLEKVADLLLEFAQADTTVKSYMCSQSLLSRLFQMFNRVEPPILLKILKCINHLSTDPNCLENLQRAEAIKYLIPNLELKEGSLVSEIHHEVLNALFNLCKINKRRQEQAAENGIIPHLMLFITSNSPLKQYALPLLCDMAHASRNSREQLRAHGGLDVYLNLLEDELWSVTALDSIAVCLAHDNDNRKVEQALLKKDAVQKLVKFFQCCPERHFVHILEPFLKIITKSSRINTTLAVNGLTPLLIARLDHQDAIARLNLLRLIKAVYEHHPQPKKLIVENDLPEKLQNLIGERRDGQVLVKQMATSLLKALHINTVL* 1405
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu11g00893 1404 SMART serkin_6 39 281 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu11g00893 1404 CDD STKc_Cdc7_like 73 281 - -
Lapu11g00893 1404 SMART arm_5 622 662 IPR000225 GO:0005515
Lapu11g00893 1404 SMART arm_5 707 754 IPR000225 GO:0005515
Lapu11g00893 1404 SMART arm_5 1189 1228 IPR000225 GO:0005515
Lapu11g00893 1404 SMART arm_5 1143 1187 IPR000225 GO:0005515
Lapu11g00893 1404 MobiDBLite consensus disorder prediction 383 404 - -
Lapu11g00893 1404 MobiDBLite consensus disorder prediction 383 409 - -
Lapu11g00893 1404 MobiDBLite consensus disorder prediction 335 356 - -
Lapu11g00893 1404 FunFam MAP3K epsilon protein kinase 1-like 1058 1399 - -
Lapu11g00893 1404 MobiDBLite consensus disorder prediction 849 884 - -
Lapu11g00893 1404 FunFam MAP3K epsilon protein kinase 1 66 313 - -
Lapu11g00893 1404 MobiDBLite consensus disorder prediction 434 450 - -
Lapu11g00893 1404 SUPERFAMILY ARM repeat 1272 1395 IPR016024 -
Lapu11g00893 1404 Gene3D Transferase(Phosphotransferase) domain 1 56 314 - -
Lapu11g00893 1404 MobiDBLite consensus disorder prediction 499 515 - -
Lapu11g00893 1404 Pfam Protein kinase domain 70 281 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu11g00893 1404 MobiDBLite consensus disorder prediction 498 522 - -
Lapu11g00893 1404 MobiDBLite consensus disorder prediction 1008 1040 - -
Lapu11g00893 1404 MobiDBLite consensus disorder prediction 792 943 - -
Lapu11g00893 1404 MobiDBLite consensus disorder prediction 299 367 - -
Lapu11g00893 1404 ProSiteProfiles Protein kinase domain profile. 1 281 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu11g00893 1404 PANTHER MITOGEN-ACTIVATED KINASE KINASE KINASE 70 734 - -
Lapu11g00893 1404 SUPERFAMILY ARM repeat 594 1295 IPR016024 -
Lapu11g00893 1404 Gene3D - 584 795 IPR011989 -
Lapu11g00893 1404 Gene3D - 1062 1212 IPR011989 -
Lapu11g00893 1404 PRINTS Tyrosine kinase catalytic domain signature 250 272 IPR001245 GO:0004672|GO:0006468
Lapu11g00893 1404 PRINTS Tyrosine kinase catalytic domain signature 141 159 IPR001245 GO:0004672|GO:0006468
Lapu11g00893 1404 PRINTS Tyrosine kinase catalytic domain signature 103 116 IPR001245 GO:0004672|GO:0006468
Lapu11g00893 1404 PRINTS Tyrosine kinase catalytic domain signature 207 229 IPR001245 GO:0004672|GO:0006468
Lapu11g00893 1404 FunFam MAP3K epsilon protein kinase 1 584 796 - -
Lapu11g00893 1404 MobiDBLite consensus disorder prediction 911 943 - -
Lapu11g00893 1404 MobiDBLite consensus disorder prediction 422 457 - -
Lapu11g00893 1404 Gene3D - 1213 1399 IPR011989 -
Lapu11g00893 1404 SUPERFAMILY Protein kinase-like (PK-like) 60 282 IPR011009 -
Lapu11g00893 1404 ProSitePatterns Serine/Threonine protein kinases active-site signature. 147 159 IPR008271 GO:0004672|GO:0006468
Lapu11g00893 1404 MobiDBLite consensus disorder prediction 885 910 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu11g00893 Lapu-Chr11 11528060 11548973 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu11g00893 69 1404 MAP Kinase Kinase Kinase AT3G13530 71.228 0.0 1862
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE-Pl Lapu11g00893 Pkinase 9.1e-60 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu11g00893 - - gmx:100813256 2419.42