Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu11g00887 ATGCTTCTGGACAAGAATGTAATTCAGGAAACCCATTATGAGGTTCTCAATGTCAAAGAAGATGCAAATTATGAAGAAATTCGTGCTAGTTACCGCAGTGCTGTACTCAGCTTACATCCTGATAAGTTATTGAAGATGTCAGAGACATCCAGCAGTAATCAAATAGATGGAGAGAGATTTCTCAAAGTACAGAAGGCATGGGAAGTTCTGAGTGATTCAAGCTCCCGTTCGTTTTATGATAACGAGCTGCGAAGCACGAGGCAGGATTTGCTGGCTGCGGAGGTTGCTGAAGATTTGAGCTTAGAGGATATGATGCTTGAAGATGCTGGAGAAGCTTTGGAACTGTTCTATCAATGCCGGTGTGGTGATTACTTCTCTATAGACTCTGTGGAATTGAAGAAAATGGGATATTCCTTATTAAGGGAGGGAAGTGGGATATCTGTACTCAATGCTGATACTTTACCAGGATCAGTGATTCTTCCATGTGGATCTTGTTCGTTAAAGGCTCGTCTACTAATCAATATGGATCACAGTTGA 537 0.4153 MLLDKNVIQETHYEVLNVKEDANYEEIRASYRSAVLSLHPDKLLKMSETSSSNQIDGERFLKVQKAWEVLSDSSSRSFYDNELRSTRQDLLAAEVAEDLSLEDMMLEDAGEALELFYQCRCGDYFSIDSVELKKMGYSLLREGSGISVLNADTLPGSVILPCGSCSLKARLLINMDHS* 179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu11g00887 178 Pfam DnaJ domain 11 80 IPR001623 -
Lapu11g00887 178 SUPERFAMILY Chaperone J-domain 10 84 IPR036869 -
Lapu11g00887 178 FunFam DNAJ heat shock N-terminal domain-containing protein-like 89 177 - -
Lapu11g00887 178 Pfam CSL zinc finger 98 172 IPR007872 -
Lapu11g00887 178 PRINTS DnaJ domain signature 13 31 IPR001623 -
Lapu11g00887 178 PRINTS DnaJ domain signature 31 46 IPR001623 -
Lapu11g00887 178 PRINTS DnaJ domain signature 55 75 IPR001623 -
Lapu11g00887 178 SMART dnaj_3 10 75 IPR001623 -
Lapu11g00887 178 SUPERFAMILY CSL zinc finger 96 176 IPR036671 -
Lapu11g00887 178 Gene3D DPH Zinc finger 94 178 IPR036671 -
Lapu11g00887 178 FunFam DNAJ heat shock N-terminal domain-containing protein-like 2 86 - -
Lapu11g00887 178 Gene3D DnaJ domain 4 93 IPR036869 -
Lapu11g00887 178 PANTHER DPH3 HOMOLOG-RELATED 11 175 IPR044248 GO:0017183|GO:0046872
Lapu11g00887 178 ProSiteProfiles dnaJ domain profile. 11 83 IPR001623 -
Lapu11g00887 178 CDD DnaJ 11 72 IPR001623 -
Lapu11g00887 178 ProSiteProfiles DPH-type metal-binding (MB) domain profile. 95 174 IPR007872 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu11g00887 12 80 C2H2 Transcription Factor Family AT1G74250 43.056 1.00e-10 57.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu11g00887 K17867 - gmx:100814856 310.457