Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu11g00870 ATGGAGAGATCCTATGTTTTTGTTTTTCTCTCTGTCTCTGTGCTTTGTCTCTTCCTGTCCCAACCCACCAGATCAGAAGACGATTCCCAACCACTTCTCGCTCTTAAATCCTCCATTGACGTTCTCCACAAGCTCCCATGGCGACAGGGAACCAACGTGTGCTCCTGGGAAGGGGTCAGAGACTGCTTCAACGGAAGAGTCAGAAAGCTCGTTCTAGAACACTCCAACCTAACCGGTTCTCTTGATTCCAAGATCTTGAACCGTTTGGACCAGCTCCGAGTCCTCAGCTTCAAAGGAAACTCACTGTCCGGCCAAATACCTAACCTCTCCGCCTTGATCAACCTCAAATCGATTTTCCTCAACGACAACAACTTCTCCGGCGAGTTCCCCTCCTCGGTCGCGCTGCTCCACCGCGTCAAGGTCATTGTCCTGTCGCAAAACCACATCTCCGGCGACATTCCAGCGTCTCTACTGAATCTCCGGCGACTCTACATTCTCTACCTGGAAGACAACGCGTTCACGGGAAGCATCCCGGGTTTCAACCAAACCAGCCTCAGGTATTTGAATGTCTCCAACAACCGACTCTCCGGCGAGATTCCGGTGACCGCCGCACTGATCCGGTTCAATGCGTCGTCGTTTTCAGGCAACCCGGGGCTCTGCGGGGAGAACATCCACCAACCGTGCAAAAACGGCAGCGTTTCATTGCCGCCGACAATAAGTCCCAGCTATCCGCTGATCCCGGGAGGCACCGCGACGGCGTCGACGTCGACCTCATCGAAGCGCTCGAAACTGCTAAAGATAATTGGAGGGAGCGTTGGTGGCGTTGTTTTTATTGCGGTGTGCATGGTTGTGGTGTGGGCGATTAGCAGGAAACGGAAGACGAGGGTGGGTTCCGGAAGGAGGAGCAAGGGAGGTGGTGACGTGGCAGAGGGGGAGGTGGGTGCGGCGGGGAGTGCGGGAGGTGGCGGCGGAGAGGGTGGGGATGGTAATAAACAAGGGGGTTTTGCGTGGGAAGGCGAGGGTCTAGGGAAGCTGGTGTTCTGCGGAGGAGGTGATCGGGAGATGAGTTATAGTTTGGAGGATTTGCTGAAGGCTTCGGCGGAGACTCTGGGGAGGGGTATTATTGGAAGTACGTATAAAGCAGTTATGGAATCAGGTTTCATTGTTACTGTGAAGAGGTTGAAGGATGCTAGGTACCCTGGTTTGGAAGAGTTCAGGGCTCACATTCAAGTCCTTGGGACCCTCACCCACCCTAACTTGGTCCCTCTCAGAGCTTATTTTCAGGCCAAGGAGGAACGTCTTCTCGTTTATGACTACTTTCCCAATGGCAGCCTCTTCTCCCTTATCCACGGATCAAAAACATCTGGCGGGGGAAAGCCTCTTCACTGGACATCCTGCCTTAAGATTGCGGAAGATCTAGCTACAGGCCTGCTCTATATCCACCAGAACCCCGGCATGACGCATGGAAACCTAAAATCTTCTAATGTGTTGCTTGGTTCTGATTTCGAGTCATGTCTTACTGATTATGGTCTCACTGTGTTCCTAAATCCTGACTCAATGGATGAGCCTAGTGCCACTTCTTTATTCTATAGAGCACCTGAATGCCGCAACTTTCAAAGGTCACAAACTCAACCAGCTGATGTATACAGCTTCGGGGTCCTTGTTCTAGAGCTTCTAACTGGAAAAACACCCTTCCAAGATCTTGTTCAGACGTATGGTTCAGACATACCAAGGTGGGTCAGGTCAGTGCGCGAAGAAGAGACAGAGTCAGGGGATGATCCTGCCTCAGGCAATGAAGCATCAGAAGAGAAACTTCAGGCTCTTTTGAACATTGCCATGGCATGTGTTTCGCTGGTGCCAGAGAACAGGCCTACAATGAGAGAGGTTTTAAAGATGATAAGAGATGCAAGAGGGGAGGCGCATGTCTCATCTAACAGTAGTGATCACTCCCCTGGTAGATGGTCAGATACTGTTCAAAGCTTTCCAAGGGAAGAACACCAGAGCATATGA 2010 0.5159 MERSYVFVFLSVSVLCLFLSQPTRSEDDSQPLLALKSSIDVLHKLPWRQGTNVCSWEGVRDCFNGRVRKLVLEHSNLTGSLDSKILNRLDQLRVLSFKGNSLSGQIPNLSALINLKSIFLNDNNFSGEFPSSVALLHRVKVIVLSQNHISGDIPASLLNLRRLYILYLEDNAFTGSIPGFNQTSLRYLNVSNNRLSGEIPVTAALIRFNASSFSGNPGLCGENIHQPCKNGSVSLPPTISPSYPLIPGGTATASTSTSSKRSKLLKIIGGSVGGVVFIAVCMVVVWAISRKRKTRVGSGRRSKGGGDVAEGEVGAAGSAGGGGGEGGDGNKQGGFAWEGEGLGKLVFCGGGDREMSYSLEDLLKASAETLGRGIIGSTYKAVMESGFIVTVKRLKDARYPGLEEFRAHIQVLGTLTHPNLVPLRAYFQAKEERLLVYDYFPNGSLFSLIHGSKTSGGGKPLHWTSCLKIAEDLATGLLYIHQNPGMTHGNLKSSNVLLGSDFESCLTDYGLTVFLNPDSMDEPSATSLFYRAPECRNFQRSQTQPADVYSFGVLVLELLTGKTPFQDLVQTYGSDIPRWVRSVREEETESGDDPASGNEASEEKLQALLNIAMACVSLVPENRPTMREVLKMIRDARGEAHVSSNSSDHSPGRWSDTVQSFPREEHQSI* 670
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu11g00870 669 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 14 638 IPR046959 -
Lapu11g00870 669 MobiDBLite consensus disorder prediction 640 669 - -
Lapu11g00870 669 FunFam Nuclear pore complex protein NUP107 25 179 - -
Lapu11g00870 669 Gene3D Phosphorylase Kinase; domain 1 351 439 - -
Lapu11g00870 669 Pfam Leucine rich repeat N-terminal domain 26 60 IPR013210 -
Lapu11g00870 669 ProSiteProfiles Protein kinase domain profile. 364 642 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu11g00870 669 MobiDBLite consensus disorder prediction 643 669 - -
Lapu11g00870 669 Pfam Protein kinase domain 367 631 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu11g00870 669 Gene3D Ribonuclease Inhibitor 182 231 IPR032675 -
Lapu11g00870 669 SUPERFAMILY Protein kinase-like (PK-like) 368 644 IPR011009 -
Lapu11g00870 669 Gene3D Ribonuclease Inhibitor 25 181 IPR032675 -
Lapu11g00870 669 SUPERFAMILY L domain-like 27 222 - -
Lapu11g00870 669 MobiDBLite consensus disorder prediction 296 333 - -
Lapu11g00870 669 Gene3D Transferase(Phosphotransferase) domain 1 440 656 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu11g00870 Lapu-Chr11 11323121 11328781 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu11g00870 14 669 Receptor kinase-like Gene Family AT1G60630 61.027 0.0 775
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Lapu11g00870 Pkinase 1.7e-35 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu11g00870 - - gmx:100809866 1107.43