Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu11g00843 ATGGCAGTTGAAAAGAGGTTTGTTTTGGTGGGGATTAGAATTGATGGCCATAGTAGACAGCTTCTCAACTGGGCACTTGTCAAAGTTGCTGAACCAGGGGATTGTGTTGTAGCAGTTCATGTTATTAAAAATCCAGATCATGTTTCCAAAACCAAGACTCTGATAGATGGCTATTTAGAAGTGTATGAAGGGCTATGTGGTGTTAAGAAGGTAGGTCTCACTGGTCAAATCTTCTATGGAAGCTCCGTTCGAAACATTCTTGTTAGAGAAGCAAAAAGGCATGCTGCTCTGGCTCTAGTGGTAGGGGGTGGAGCTGACTCAGCTAAATATTGCGCCAAACGACTACCACCCACCACCAATGTTCTAGCCATCCAAGGCTCAAGGATTGTCTATAGGAGCTCCACCAATAAACAAGAACCAGGCGGTCTTATAATGGATCCAAGACCAAGCTTAACAAGCATAGGAGAAAACTTGAGTGACAGAGTAAATCAGTCTACATTTGGTGACTCCCCCCTGGAGACTGAGAAATCAGCAAGCAAAAATTCCTTAGAATTGAAGGAAGAAGAATTTAACGGATTAGAAAAGTGTAAGTCAAGGTCAATATCCATGTTTGCAGGTGATTCAGCTGAGCAAAAGCTTGGTTGGCCTCTACTCCGCGGAGTCTACTTGGGAACGTCACAAACCCACCATGCAAGGAATATGTCAGTAGTACAATGGGTAATGACCTTACCAGATCGTTCCCCAAATAAAAGTCCCTGCTCTTCTTCCTCTGAGGAAAATCCATTTGAAAGGAGCATCAGCGATATTGATGATGAGAGCTCTAAATTTTCTTCAGCTCCATCTGTTGAGCTACCAAATGGCCTTGAGAAGATGCTACGCGTAAATTCAATCAACTGCGAGCGGTTCAGCCTAGAAGTTCTGCAGTCTTGCACTAGACAATTTTCTTCAGAAAACTTGGTTGGGAAAGGAGGGAGCAATCGTGTGTACAAAGGAGTCCTCCCTGATGGAAAGCCAGTAGCCGTTAAAGTATTGCAGTCATCAAAAGAAGGCTGGAAAGATTTTGCCGTTGAGGTGGATATAATATCCTCATTGAGGCACAAAAGCATTACCCCTCTACTAGGGGTTTGCACAGAGAACAATACTTTAATCTCTGTTTATGATTATTTGCCCCAAGGCAGCTTAGAGGAAAATCTGCATGGAAAGAGCAAATTGTCATGGGAAATAAGATTTAATGTGGCAGTTAGGATCGCTGAAGCCCTCGATTACCTACACAGGGAAGCTTTGAAACCTGTTATACATAGAGATGTCAAGTCTTCTAACATTCTTCTTTCCCAAGGGTTTGAACCTCAGTTATCTGATTTCGGACTTGCAATACGGGGACCAGCAACTTCATCCTTTTTGACCCAAGATGTAGTAGGAACATTTGGTTATCTTGCTCCTGAATACTTCATGTATGGAAAGGTTAGCGACAAGATAGATGTTTATGCCTTCGGTGTAGTTCTACTTGAACTAATCTCAGGAAGGGAACCAATCAGCTCAGCAGCTTGCAAAGGACAGGAGAGCTTGGTCGTATGGGCAAAACCAATAATAGACAGTGGGGACATTAAAGGTTTATTGGACCCAGATTTAGAAGGGAAATTTGATGAGCTTCAATTGCAAAGAATGATTATGGCAGCATCCTTATGCATCACTCGGGCTGCTCGACTTCGTCCTAAATTGAATCAGATACTGAAGATCCTACAAGGTGATGAGAAAGTTGAATATTTGCTAAAGTCAGATGGGAATGACGAGGAGGTTTCAGAAAATGGAGAAAATATTGATGATGAAGTGTATCCAAGTTCAAGTGCTGAGTTACACTTGAGTCTTGCTTTACTTGGTGTGAACGATGACAATGCATCACAAACTAGCACTGAGCTTAGTTATAGTGAGCACTTGAAAGAACCATGGAGCAGGTCATCAAGTTTCAATTAG 1971 0.4242 MAVEKRFVLVGIRIDGHSRQLLNWALVKVAEPGDCVVAVHVIKNPDHVSKTKTLIDGYLEVYEGLCGVKKVGLTGQIFYGSSVRNILVREAKRHAALALVVGGGADSAKYCAKRLPPTTNVLAIQGSRIVYRSSTNKQEPGGLIMDPRPSLTSIGENLSDRVNQSTFGDSPLETEKSASKNSLELKEEEFNGLEKCKSRSISMFAGDSAEQKLGWPLLRGVYLGTSQTHHARNMSVVQWVMTLPDRSPNKSPCSSSSEENPFERSISDIDDESSKFSSAPSVELPNGLEKMLRVNSINCERFSLEVLQSCTRQFSSENLVGKGGSNRVYKGVLPDGKPVAVKVLQSSKEGWKDFAVEVDIISSLRHKSITPLLGVCTENNTLISVYDYLPQGSLEENLHGKSKLSWEIRFNVAVRIAEALDYLHREALKPVIHRDVKSSNILLSQGFEPQLSDFGLAIRGPATSSFLTQDVVGTFGYLAPEYFMYGKVSDKIDVYAFGVVLLELISGREPISSAACKGQESLVVWAKPIIDSGDIKGLLDPDLEGKFDELQLQRMIMAASLCITRAARLRPKLNQILKILQGDEKVEYLLKSDGNDEEVSENGENIDDEVYPSSSAELHLSLALLGVNDDNASQTSTELSYSEHLKEPWSRSSSFN* 657
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu11g00843 656 MobiDBLite consensus disorder prediction 247 262 - -
Lapu11g00843 656 FunFam Putative receptor-like serine/threonine-protein kinase 389 596 - -
Lapu11g00843 656 SMART serkin_6 314 579 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu11g00843 656 FunFam probable receptor-like serine/threonine-protein kinase At5g57670 283 388 - -
Lapu11g00843 656 Pfam Protein kinase domain 316 515 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu11g00843 656 SUPERFAMILY Protein kinase-like (PK-like) 296 580 IPR011009 -
Lapu11g00843 656 ProSitePatterns Serine/Threonine protein kinases active-site signature. 431 443 IPR008271 GO:0004672|GO:0006468
Lapu11g00843 656 ProSiteProfiles Protein kinase domain profile. 314 589 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu11g00843 656 Gene3D Transferase(Phosphotransferase) domain 1 389 596 - -
Lapu11g00843 656 PANTHER OS08G0249100 PROTEIN 200 600 IPR046958 -
Lapu11g00843 656 MobiDBLite consensus disorder prediction 247 281 - -
Lapu11g00843 656 Gene3D Phosphorylase Kinase; domain 1 281 388 - -
Lapu11g00843 656 CDD USP_Like 8 102 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu11g00843 Lapu-Chr11 11095894 11099782 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu11g00843 301 583 Trihelix Transcription Factor Family AT1G70460 43.493 1.63e-72 246
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Lapu11g00843 Pkinase 1.5e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu11g00843 - - gmx:100789189 1033.86