Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu11g00803 ATGGCTCTTGCTTGGAATTTAGTCATTACTCTCATACTTCTTGTTCTGCAACAACAATCTTGTGTCCTTGTCACCTTTGCCTCAAGCAATGTTCATATTGTGTATATGGGCGACAGCAGAATAAAGCAGACTGAGCAACAGTTGGTTGAAGACTCCCACGTTGACATACTATCTCATATTCTCGGAAGCAAAGACGCTGCTAGGAAGTCCATCCTGTATAGCTATAAGCATGGCTTTTCTGGATTCGCTGCAGTTTTAAGTCAGTCCCAAGCTAGGCTCATTGCAGATTTCCCGGGGGTCGTCCGTGTAATTCCAAATAAAATTCTCAGTCTTCACACAACAAGAAGCTGGGACTTCTTGCACGTAAAGCAAGAAACAATAACCGGTGCTCCTTCTAGGGGTCAATCTGGAAGAGGCACCATCATCGGGATCATGGACACTGGTATTTGGCCAGAGTCTGAGAGCTTTAGAGATGAGCACATGGACAATCCTCCTCTTCACTGGCGTGGTATATGCCAAGGAGGAGAAAATTTTGACCTCTCCCTTTGCAATAGGAAAATTATTGGTGCACGTTGGTATATTAAAGGATATGAAGCTGAAATTGGTAAACTAAATACAAGCGATGGGGTGGAGTACTTGTCTCCTCGAGATGCATCAGGCCATGGCACTCACACATCATCCACTGCAGCTGGCCTTGCAGTGGAAAACGCAAGCTTTATGGGACTAGCTAAAGGATTGGCAAGAGGTGGTGCTCCATCAGCTTGGTTAGCTGTCTACAAAATTTGTTGGTCTACTGGTGGATGCAGCTCTGCAGATATCCTTGCAGCTTTTGATGATGCAATATTTGATGGGGTTGACATTCTTTCTGCATCTCTTGGCTCAGATCCTCCGCTTCCTACTTATGTTGAGGATGCACTGGCCATTGGTTCTTTTCATGCTGTTGCTAAAGGAATTTCTGTGGTATGTTCTGGTGGCAATTCTGGTCCATATTCCCAAACTGTCATAAACACTGCACCTTGGGTTATTACAGTTGCTGCTAGTACCATAGACAGAGAATTTCCATCTAGGATTATCCTCGGAAACAATCAAACTCTACAGGGTCAGAGTTTATATACAGGGAAAGATTTGACCAAGTTTTATCCAATTGTTTTTGGAGAAGACATAGCAGCTTCGGATGCTGATGAAGAAAGCGCAAGGAGCTGCAATTCTGGGAGCCTGAATGCCACCTTAGCAAAAGGAAAAGCGATTCTGTGTTTCCAGTCTCGGTCACAGAGGTCGGCCACAGTTGCTATAAGAACAGTTACGGAAGCTGGGGGCACCGGTCTCATATTTGCTCAGTTTCCTACTAAAGATGTTGATACATCATGGAGTAAACCCTGTGTCCAAGTTGATTTTATCACGGGAACAACTATTCTATCATACATAGAAGCAACTAAGAATCCTGTAATAAAGTTTGGCAAAACAAAAACAGTTGTGGGCCAACAGATATCACCTGAAGTGGCATTCTTCTCTTCGCGAGGACCAAGTTCTCTGTCTCCTTCAGTATTAAAGCCTGACATTGCTGCTCCTGGGGTTAATATTCTTGCGGCCTGGTCACCTGCTTCTTCTTCTGGGGCATCTGATGCACATTTAGAAAAGCTGCAACCCCTTAACTTCAACATTGAGTCAGGAACTTCCATGGCATGCCCTCACATTTCTGGTATTGTTGCACTTATAAAAACTGTCCATCCAACTTGGAGCCCCGCTGCAATTAAATCTGCCCTTGTCACAACGGCTTCTCTGAAAAATGAATACAAGCAATATATTTGGGCTGAGGGAGCACCACATAAACTAGCTGATCCATTTGACTACGGTGGTGGACATGTTGATCCAAACAAAGTGACAGATCCTGGTCTAGTATATGACATGAAAAACTCAGACTACATTCATTTCCTTTGTTCCATGGATTACAATGACACTGCCATAAGCTTGTTGACAGGATTTCCTACCAAATGCCATAAATCACACAAGTACCTCTTAAACATGAATCTCCCTTCTATTATTATTCCTGAGCTGAAGCAATCCCTCACAGTTTCAAGAACAGTCACTAATGTTGGCTCAATCAAATCTATCTACACTGCTCGTGTTGAAGCTCCAATTGGCGTATCCGTCACAGTTGTGCCATCAACCTTAACATTCAGTCCTAAACAAAAGAAAATGAAATTTAAGGTAACCTTTTCTTCGAAGCTACGAATTCAAAGCAGATTCTCATTTGGCTACCTCTTGTGGGAAGATGGGTCACATGAAGTCAGAATGCCATTAGCAGTTCGCTCTGTAGTACAAGAATTTTGTGTACAAACTTAA 2343 0.4319 MALAWNLVITLILLVLQQQSCVLVTFASSNVHIVYMGDSRIKQTEQQLVEDSHVDILSHILGSKDAARKSILYSYKHGFSGFAAVLSQSQARLIADFPGVVRVIPNKILSLHTTRSWDFLHVKQETITGAPSRGQSGRGTIIGIMDTGIWPESESFRDEHMDNPPLHWRGICQGGENFDLSLCNRKIIGARWYIKGYEAEIGKLNTSDGVEYLSPRDASGHGTHTSSTAAGLAVENASFMGLAKGLARGGAPSAWLAVYKICWSTGGCSSADILAAFDDAIFDGVDILSASLGSDPPLPTYVEDALAIGSFHAVAKGISVVCSGGNSGPYSQTVINTAPWVITVAASTIDREFPSRIILGNNQTLQGQSLYTGKDLTKFYPIVFGEDIAASDADEESARSCNSGSLNATLAKGKAILCFQSRSQRSATVAIRTVTEAGGTGLIFAQFPTKDVDTSWSKPCVQVDFITGTTILSYIEATKNPVIKFGKTKTVVGQQISPEVAFFSSRGPSSLSPSVLKPDIAAPGVNILAAWSPASSSGASDAHLEKLQPLNFNIESGTSMACPHISGIVALIKTVHPTWSPAAIKSALVTTASLKNEYKQYIWAEGAPHKLADPFDYGGGHVDPNKVTDPGLVYDMKNSDYIHFLCSMDYNDTAISLLTGFPTKCHKSHKYLLNMNLPSIIIPELKQSLTVSRTVTNVGSIKSIYTARVEAPIGVSVTVVPSTLTFSPKQKKMKFKVTFSSKLRIQSRFSFGYLLWEDGSHEVRMPLAVRSVVQEFCVQT* 781
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu11g00803 780 FunFam Subtilisin-like protease SBT1.5 139 361 - -
Lapu11g00803 780 Pfam Fibronectin type-III domain 674 769 IPR041469 -
Lapu11g00803 780 Gene3D - 350 492 - -
Lapu11g00803 780 Pfam Peptidase inhibitor I9 31 112 IPR010259 -
Lapu11g00803 780 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 24 112 IPR037045 -
Lapu11g00803 780 ProSitePatterns Serine proteases, subtilase family, serine active site. 557 567 IPR023828 -
Lapu11g00803 780 FunFam Subtilisin-like protease SBT1.5 645 772 - -
Lapu11g00803 780 Pfam Subtilase family 137 593 IPR000209 GO:0006508|GO:0008236
Lapu11g00803 780 Gene3D Peptidase S8/S53 domain 139 641 IPR036852 GO:0004252|GO:0006508
Lapu11g00803 780 SUPERFAMILY Subtilisin-like 111 632 IPR036852 GO:0004252|GO:0006508
Lapu11g00803 780 PRINTS Subtilisin serine protease family (S8) signature 217 230 IPR015500 -
Lapu11g00803 780 PRINTS Subtilisin serine protease family (S8) signature 137 156 IPR015500 -
Lapu11g00803 780 PRINTS Subtilisin serine protease family (S8) signature 556 572 IPR015500 -
Lapu11g00803 780 Gene3D - 645 773 - -
Lapu11g00803 780 FunFam Subtilisin-like protease SBT5.3 22 112 - -
Lapu11g00803 780 CDD Peptidases_S8_3 111 593 IPR034197 -
Lapu11g00803 780 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 33 769 IPR045051 -
Lapu11g00803 780 FunFam subtilisin-like protease SBT1.5 350 492 - -
Lapu11g00803 780 CDD PA_subtilisin_like 357 484 - -
Lapu11g00803 780 ProSiteProfiles Serine proteases, subtilase domain profile. 116 628 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu11g00803 Lapu-Chr11 10852092 10858533 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu11g00803 29 776 Subtilisin-like Serine Gene Family AT1G32960 47.431 0.0 679
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu11g00803 - - gmx:100775442 1362.05