Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu11g00785 ATGGTTCAAAGAATGGTTCTACGCAAGCTTGGTATCCAAGCTGATCGTGTCAAATCTGACAAGTGCTTAGCAAACTCGAAGCCATCTTCCTCTCAGTACCAGGATGGCAAAACCAGAAAAGCTGATAAGATGAAGGAAATGATGATGTCAAGGTCCTTTCAGCTTTCAGATTTTGAGCTTTCTCATTCATCATCTTCGGTAAAGAGCTTATCCCAACCAAGAAAGTCACCACCTCTTCAAGTTCCAACTATTGCAGCATCCCCACAACAGCAAAGGGCTTTGGTCAGAAGGTCACCCAATTACATGAAGCCTACCAGCAGTTCAGAAGCAAAAAAAGAACTTTTGTCGGTTAGTCATCGGCATACTCAATCTAGTTCAGATGGTAAGAGTCTACCACAAAAATGTATGAGAAATTCAAAAACTAGTTTCGTTTCTTGCAAAGAACCTGCAAAAACTTTGTCTAGATCGTGTAATTTGAATTCAATGAGAACATTAACAAAAACTCCTAGTTTTAAGCCTTGTAAAGCTTGTTCAGAAAAATTCACATCAGCAGTTCTGTTTGAAGACGTGAATGCACCAAATAGGGCTACCTGCTCTTCAACTTTGAAAGACTGTAACTTTCCCGAGTACCTCATGCTTCACTCCGGGGGAACCGAGTCTGAGGGAGTTTCAGTCATGAAGGTTTGCCCATATACATACTGTTCTCTTAATGGCCATGGTCATGCTCCTTTGCCTCCTCTGAAGAGCTTCATGTCAGCGAGGAGGCATCTTTTGGAGACTCAGAAGAATACGAAGCTTGAAGTTGTGATCCCTCAAAGATGGAAGGTGCCTTGCTGTGATACTGAACAAGAATCTGATATTGAGCCAATTGTATTTCATGGAAAACCTGCATGTGATGAAGCTACTACAGGTAATCCAACAATCGCTCCCTTGGCACAAGAAATTGGTATGGATTTCTTTTTTGAAATCTATGCAAAGGAAAGGGAAGGAGACGACGAAATTAGAAAATTCAACTCTGTCAAAGACCTTGACGAACAAGAAGATATCAATTTTGCAAAGGATGAGAATGTCGTTGCAGCAGAAGAGGATGGTGTGAAGCAAGTTACTCCAGGTGTGACTCATGATCTCCCAAAGTCTCCGATCAATTTTGAAGATGATTTCAAAAACTACTTGAGTGCTGCTGCGATTGAAGCAGATAACAAAGGGAGCTTTCATCTAGGACAAGATGTTGAAGATGCAGAGGAAAACCACTCACATAGCTGGTTTCATGAAGAAACCTGTACAGGAAGCTATTGCAATGAGGCTAGATATGATGGGGAACACATGGAGGATACTGAATTGGATGAATCCAATTCCCAAAGCTGGGAGGTGGAACATTTCCGTGAATTCATCTATGAAGACAATACCGATTCTTCCACTTGCTCAGTGGAGGAGATCAACTCAAAACTCAACTCCTTATCAGGGAGTTCGCATCATATATCTGAAACGTTGTTAGAGGACACCTTTAGCAGCCATGCAGACATTATGGTTGAAGAGGTGAGACTCCAAGAAGCCAAAGAAGAGAGGAGAATCAGTTTTGAAGCACAGCCTCGTTGCACTAATTTTGTCCTGGAAGACACAAGTGAAAGCATCGAGTTTGTGATTCAAGAAACATATTATCCATCCAAAGGTATAAATTCTGAGTATGATCAATCTAATTTGACCGAGGAAGTATTTCAGCATCTAACTAATGCAAAAGATAACAGAAGAGAAAATGAGAAACATTTGGATTATGAGGTTGGTTGTGTCTCAATGGTACTTGATGAAGAGACAACTGAAAATAGCGAAGGCCACAAGACTGGCGAAAGTTGCAAGATTGATGAGAGCTGTGAAGACAAAGATGCAGGCCTAGAGAACGATGATGATGAATTTAACCAGGAGCACCTAATTCACATGTCTAAAGTTCCTAAAGAAAGCATCACCATTGTTGTTCAGGAGCAAAAATTATCAGATGAAAATAAGGTTAAAGGTAGTAAGTTGAAGAGCACAGGTGTTGAAGAGCAGCACAGAAGCAACAATTGGCGATGGGGAACTAAGCGCAAGAGACCTGTGGAAGAGGACGAGGAAATGAGAAAGATCAATCCACGAAAGCCAAATTTCCTGCCGTTTGTTTCTGAGCTAGAACCAGAGAAAGTTTACCTGAAGCACCAAATGATTGATGAAAGAAAAAATGCAGAGGAATGGATGCTTGATTTCGCACTCAGACAAGCTGTCACAAGACTTGCTCCGGCAGGGAAAAGGAAGGTGTCATTGCTGGTTGAAGCTTTTGAAACAGTAATGTCAATGCCCAAATGCGAAGCTCATATAAGAAATGATTCAACCTTTGCTCATGTAAGACCTATTCAAGCGTGCAGCTGA 2397 0.4134 MVQRMVLRKLGIQADRVKSDKCLANSKPSSSQYQDGKTRKADKMKEMMMSRSFQLSDFELSHSSSSVKSLSQPRKSPPLQVPTIAASPQQQRALVRRSPNYMKPTSSSEAKKELLSVSHRHTQSSSDGKSLPQKCMRNSKTSFVSCKEPAKTLSRSCNLNSMRTLTKTPSFKPCKACSEKFTSAVLFEDVNAPNRATCSSTLKDCNFPEYLMLHSGGTESEGVSVMKVCPYTYCSLNGHGHAPLPPLKSFMSARRHLLETQKNTKLEVVIPQRWKVPCCDTEQESDIEPIVFHGKPACDEATTGNPTIAPLAQEIGMDFFFEIYAKEREGDDEIRKFNSVKDLDEQEDINFAKDENVVAAEEDGVKQVTPGVTHDLPKSPINFEDDFKNYLSAAAIEADNKGSFHLGQDVEDAEENHSHSWFHEETCTGSYCNEARYDGEHMEDTELDESNSQSWEVEHFREFIYEDNTDSSTCSVEEINSKLNSLSGSSHHISETLLEDTFSSHADIMVEEVRLQEAKEERRISFEAQPRCTNFVLEDTSESIEFVIQETYYPSKGINSEYDQSNLTEEVFQHLTNAKDNRRENEKHLDYEVGCVSMVLDEETTENSEGHKTGESCKIDESCEDKDAGLENDDDEFNQEHLIHMSKVPKESITIVVQEQKLSDENKVKGSKLKSTGVEEQHRSNNWRWGTKRKRPVEEDEEMRKINPRKPNFLPFVSELEPEKVYLKHQMIDERKNAEEWMLDFALRQAVTRLAPAGKRKVSLLVEAFETVMSMPKCEAHIRNDSTFAHVRPIQACS* 799
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu11g00785 798 Pfam Plant calmodulin-binding domain 678 774 IPR012417 GO:0005516
Lapu11g00785 798 PANTHER CALMODULIN-BINDING PROTEIN-RELATED 1 774 IPR044681 GO:0005516
Lapu11g00785 798 MobiDBLite consensus disorder prediction 64 134 - -
Lapu11g00785 798 MobiDBLite consensus disorder prediction 23 43 - -
Lapu11g00785 798 MobiDBLite consensus disorder prediction 666 685 - -
Lapu11g00785 798 MobiDBLite consensus disorder prediction 64 112 - -
Lapu11g00785 798 SMART CaM_binding_2 666 774 IPR012417 GO:0005516
Lapu11g00785 798 MobiDBLite consensus disorder prediction 119 134 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu11g00785 Lapu-Chr11 10698729 10701891 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu11g00785 679 798 Calmodulin-binding Proteins AT2G38800 50.413 6.09e-28 117
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu11g00785 - - gmx:102670203 1219.53