Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu11g00782 ATGTATGCATTTGGCATAGGTATAGTTGGAAGCAAGAGAGACATGAGGAGCAGTGTGTGTTACACGCTATTGTTATTTGTTTTCATATGGTTCCGCGGTTCCAAGTGTTCGTCCTTCAGTGACATGGATGCGCTGCTGAAGCTGAAGGAGTCCATGAAGGGACACAAAGCCAAAGACGATGCGCTTAACGACTGGAAGTTTTCCACCTCGCTTTCCGCACACTGTTCATTTTCAGGCGTAAAATGCGACCAAGACCTTCGTGTTGTTGCCATCAACGTCTCCTTCGTTCCACTCTTTGGCAACGTTCCGCCGGAGATTGGACTCTTCGACAAACTCCAAAACCTAACCATTGCGCAGGACAATCTCACCGGCCAACTTCCCAAGGAGCTCGCTGCCATCACTTCCCTCAAGCTCCTCAACATCTCTCACAACTCCTTCTCCGGCAATTTCCCCGCCCAACTCCTTCTTCCCATGACCCAACTCGAAGTCCTCGACGCCTACGACAACAACTTCACCGGACCGCTCCCGGAGGAATTCGTGAAACTGGACAAACTCCGATACCTCAAGCTCGACGGGAATTACTTTTCCGGCATCATACCGGAGATATACTCGGAGTTTAAGAGCTTGGAGTTTTTGAGCTTAAGCACTAACAGTTTGTCCGGGAAGATTCCCAAGAGTTTGTCTCGGTTGAAGACGCTGGCGTTTTTAAAACTCGGATACAACAACGCTTACGAAGGTGGAATCCCGCCGGAGTTCGGCTCCATGACATCTCTGAAATACCTTGACCTCTCTAGCTGCAACCTCAGCGGCCAGATTCCTCCGAGCCTGAGCAATTTGAAGAAACTCGACACGTTGTTCTTGCAAATGAACAACCTCACCGGAACCATTCCGTCTGAACTCTCTGCCATGGAGAGCCTCATGTCACTGGATCTCTCCTTCAACGGTCTTACCGGAGAGATCCCGGAGAGTTTCTCTCAGCTGAGAAACCTCACTCTCATGAACTTCTTCCACAACAAGCTTCGCGGTTCCGTACCCTCCTTCGTCGGCGAGCTTCCGAATCTTGAAACGCTGCAGCTCTGGGAGAACAACTTCTCCTTCGTGCTACCCCAGAACCTGGGTAAAAACGGGAGGTTCAAGTTCTTCGATGTCACGAGCAACCACTTCACCGGGTTGATCCCTCCGGGTTTGTGCAAGAGTGGGAGGTTGGAAACCTTCGTCATCACCGATAATTTCTTCCACGGTTCAATCCCCGATGATATTGGAAACTGCAAGTCTCTCGTCAAAATCCGAGCCTCCAATAACTACCTTAGCGGCGACATTCCGCCAGGAATTTTCAAACTTCCTTCCGTCAAGATAATCGAGCTCGCTAACAACCATTTCAGCGGCGAACTGCCTCCGGAAATTTCTGGCGATTCTCTCGGGATTCTCACGCTTTCCAACAACTTACTGACGGGGAGAATTCCCCCGGCGTTGAAGAACTTGAGGGCTCTGCAGACACTCTCACTTGACGCGAACGAGTTGGTTGGAGAAACCCCGGGGGAGGTTTTTGTCTTACCCATGTTAACCACCGTCAACATGAGCGGCAACAATCTTACGGGAACAATACCAGAGACGTTGACTCAATGCGTTTCACTCTCCGCCGTTGACCTCAGCCGAAATATGCTCGTCGGGGAGATTCCCAGGGGCATAAAGAACCTCACGGACTTGAGCATTTTCAATGTTTCGAGAAACCTCATAACAGGACCGGTCCCTGACGAGATTCGATTCATGGCTAGCCTCACCACGCTGGATCTCTCGTACAATAACTTCAATGGAAAGCTCCCTACCGGTGGTCAGTTTTTGGTCTTCAACGACAAGTCCTTTGCAGGGAACCCCAACCTGTGTTCCTCCCGCTCTTGCCCTAATTCTTCCATCTACCCAGACGACGCCTTCGAGAAAAGGCGCGGCCCTTGGAGTTCAAAATCGACGAGGGTGATAATAATCGTGATTGTACTAGCCACCGCAGCGCTGCTGGTGGCGGTGACGGTGCACATGATGAGAAGGAGCAAGCTGCACCGGGCGATGAGGTGGAAGCTGACGGCCTTCCAGCGGCTGAACTTAAAAGCGGAGGAAGTGGTGGAGTGTCTGAAGGAAGAGAACATAATAGGAAAAGGAGGGGCGGGGATCGTGTACCGCGGCTCCATGCCGAACGGAACTGACGTGGCCATAAAGCGGTTGGTTGGGGCGGGGAGTGGGAGGAACGATTACGGGTTCAGGGCTGAGATAGAGACGCTGGGGAAGATAAGGCACAGGAACATAATGAGGCTTCTGGGCTACGTATCGAACAAGGAGACGAATTTGCTTCTTTATGAGTACATGCCAAATGGGAGCGTAGGGGAGTGGCTGCATGGGGCGAAGGGAGGGCACTTGACATGGGAGATGAGGTTCAAGATTGCAGTGGAAGCTGCTAGAGGACTCTGTTACTTGCACCATGATTGTTCTCCTCTCATCATTCACAGGGACGTCAAATCCAATAACATATTGCTCGACGCCAACCTCGAGGCCCATGTCGCCGATTTTGGACTTGCCAAGTTCCTCCACGACCCAGGTGCCTCTCAGTCCATGTCCTCCATTGCTGGCTCCTACGGCTACATTGCTCCAGAGTATGCATACACGTTGAAAGTGGACGAGAAAAGCGATGTGTACAGCTTCGGAGTGGTGCTGTTGGAGCTGATAATAGGAAGGAAACCAGTGGGGGAGTTTGGAGATGGGGTGGACATCGTTGGATGGGTCAACAAAACCAGATCGGAGATCTCTCAGCCGTCGGATGCAGCGTTGGTGTTGGCAGTGGTGGACCCAAGGCTTAGTGGGTATCCATTGACAAGTGTCATTTACATGTTCAACATTGCTATGATGTGTGTTAGGGAAATGGGACCAGCTAGGCCCACCATGAGGGAAGTGGTTCATATGCTCTCCAACCCTCCTCCTCACTCCACCACTCACACTCACACTCACACTCACAACCTCATTAATCTCTAG 3018 0.5142 MYAFGIGIVGSKRDMRSSVCYTLLLFVFIWFRGSKCSSFSDMDALLKLKESMKGHKAKDDALNDWKFSTSLSAHCSFSGVKCDQDLRVVAINVSFVPLFGNVPPEIGLFDKLQNLTIAQDNLTGQLPKELAAITSLKLLNISHNSFSGNFPAQLLLPMTQLEVLDAYDNNFTGPLPEEFVKLDKLRYLKLDGNYFSGIIPEIYSEFKSLEFLSLSTNSLSGKIPKSLSRLKTLAFLKLGYNNAYEGGIPPEFGSMTSLKYLDLSSCNLSGQIPPSLSNLKKLDTLFLQMNNLTGTIPSELSAMESLMSLDLSFNGLTGEIPESFSQLRNLTLMNFFHNKLRGSVPSFVGELPNLETLQLWENNFSFVLPQNLGKNGRFKFFDVTSNHFTGLIPPGLCKSGRLETFVITDNFFHGSIPDDIGNCKSLVKIRASNNYLSGDIPPGIFKLPSVKIIELANNHFSGELPPEISGDSLGILTLSNNLLTGRIPPALKNLRALQTLSLDANELVGETPGEVFVLPMLTTVNMSGNNLTGTIPETLTQCVSLSAVDLSRNMLVGEIPRGIKNLTDLSIFNVSRNLITGPVPDEIRFMASLTTLDLSYNNFNGKLPTGGQFLVFNDKSFAGNPNLCSSRSCPNSSIYPDDAFEKRRGPWSSKSTRVIIIVIVLATAALLVAVTVHMMRRSKLHRAMRWKLTAFQRLNLKAEEVVECLKEENIIGKGGAGIVYRGSMPNGTDVAIKRLVGAGSGRNDYGFRAEIETLGKIRHRNIMRLLGYVSNKETNLLLYEYMPNGSVGEWLHGAKGGHLTWEMRFKIAVEAARGLCYLHHDCSPLIIHRDVKSNNILLDANLEAHVADFGLAKFLHDPGASQSMSSIAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELIIGRKPVGEFGDGVDIVGWVNKTRSEISQPSDAALVLAVVDPRLSGYPLTSVIYMFNIAMMCVREMGPARPTMREVVHMLSNPPPHSTTHTHTHTHNLINL* 1006
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu11g00782 1005 ProSiteProfiles Protein kinase domain profile. 709 993 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu11g00782 1005 Coils Coil 692 712 - -
Lapu11g00782 1005 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM1 678 785 - -
Lapu11g00782 1005 FunFam Leucine-rich repeat receptor-like protein kinase 38 201 - -
Lapu11g00782 1005 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 209 985 - -
Lapu11g00782 1005 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM3 243 347 - -
Lapu11g00782 1005 Gene3D Phosphorylase Kinase; domain 1 672 785 - -
Lapu11g00782 1005 Gene3D Ribonuclease Inhibitor 40 156 IPR032675 -
Lapu11g00782 1005 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase 786 1001 - -
Lapu11g00782 1005 SMART serkin_6 709 959 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu11g00782 1005 FunFam LRR receptor-like serine/threonine-protein kinase EFR 348 638 - -
Lapu11g00782 1005 Pfam Leucine Rich repeat 592 605 IPR001611 GO:0005515
Lapu11g00782 1005 Gene3D Ribonuclease Inhibitor 346 638 IPR032675 -
Lapu11g00782 1005 SUPERFAMILY RNI-like 360 612 - -
Lapu11g00782 1005 Pfam Leucine rich repeat 281 340 IPR001611 GO:0005515
Lapu11g00782 1005 Pfam Leucine rich repeat 184 242 IPR001611 GO:0005515
Lapu11g00782 1005 Pfam Leucine Rich Repeat 257 279 IPR001611 GO:0005515
Lapu11g00782 1005 Gene3D Ribonuclease Inhibitor 244 345 IPR032675 -
Lapu11g00782 1005 Gene3D Ribonuclease Inhibitor 157 243 IPR032675 -
Lapu11g00782 1005 Gene3D Transferase(Phosphotransferase) domain 1 786 1002 - -
Lapu11g00782 1005 SUPERFAMILY RNI-like 91 413 - -
Lapu11g00782 1005 Pfam Protein tyrosine and serine/threonine kinase 710 982 IPR001245 GO:0004672|GO:0006468
Lapu11g00782 1005 SUPERFAMILY Protein kinase-like (PK-like) 699 984 IPR011009 -
Lapu11g00782 1005 ProSitePatterns Serine/Threonine protein kinases active-site signature. 830 842 IPR008271 GO:0004672|GO:0006468
Lapu11g00782 1005 SMART LRR_typ_2 590 613 IPR003591 -
Lapu11g00782 1005 SMART LRR_typ_2 206 230 IPR003591 -
Lapu11g00782 1005 SMART LRR_typ_2 351 375 IPR003591 -
Lapu11g00782 1005 SMART LRR_typ_2 447 471 IPR003591 -
Lapu11g00782 1005 SMART LRR_typ_2 518 542 IPR003591 -
Lapu11g00782 1005 SMART LRR_typ_2 255 279 IPR003591 -
Lapu11g00782 1005 SMART LRR_typ_2 303 327 IPR003591 -
Lapu11g00782 1005 SMART LRR_typ_2 182 205 IPR003591 -
Lapu11g00782 1005 Pfam Leucine rich repeat N-terminal domain 40 83 IPR013210 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu11g00782 Lapu-Chr11 10680092 10683890 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu11g00782 34 988 Receptor kinase-like Gene Family AT1G75820 60.960 0.0 1190
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Lapu11g00782 PK_Tyr_Ser-Thr 8.1e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu11g00782 K00924 - gmx:732625 1647.48