Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu11g00777 ATGGCTTCCTCAAGTGGAACATGTTCAGGGTCATCCTCTCAGCTTCAGAACTCAGGTTCTGAGGAGGACTTGCAAGCAGTAATGGATCAGAGAAAGAGGAAGAGAATGATATCAAATCGCGAATCTGCACGGCGATCTCGCATGAGGAAGCAGAAACACTTGGACGATCTGGTTACCCAAGTGGCTCAACTGAGGAAGGAGAATCAGCAGATACTCACCAGCGTGAACATCACCACGCAACAGTTCTTGAGCGTTGAGGCTGAAAACTCAGTACTGAGGGCTCAGGTGGGAGAGCTCAGCCACAGGTTAGAGTCTCTCAACGAGATCATGGAGGTCCTGAATGCGGGTTTGGGTGGCAGCACCACCTTCATTGAACCAACCACCAATGATACCTTCTTCAACCCCATGAACATGGGGTATCTGAACCACCCTATCATGGCCTCTGCAGACATATTGCAGTACTGA 465 0.4989 MASSSGTCSGSSSQLQNSGSEEDLQAVMDQRKRKRMISNRESARRSRMRKQKHLDDLVTQVAQLRKENQQILTSVNITTQQFLSVEAENSVLRAQVGELSHRLESLNEIMEVLNAGLGGSTTFIEPTTNDTFFNPMNMGYLNHPIMASADILQY* 155
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu11g00777 154 CDD bZIP_plant_GBF1 32 82 IPR045314 GO:0003700|GO:0006355
Lapu11g00777 154 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 29 92 IPR004827 GO:0003700|GO:0006355
Lapu11g00777 154 MobiDBLite consensus disorder prediction 1 52 - -
Lapu11g00777 154 Coils Coil 47 74 - -
Lapu11g00777 154 Pfam bZIP transcription factor 31 75 IPR004827 GO:0003700|GO:0006355
Lapu11g00777 154 SMART brlzneu 27 91 IPR004827 GO:0003700|GO:0006355
Lapu11g00777 154 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 34 49 IPR004827 GO:0003700|GO:0006355
Lapu11g00777 154 MobiDBLite consensus disorder prediction 1 24 - -
Lapu11g00777 154 FunFam BZIP transcription factor 29 80 - -
Lapu11g00777 154 PANTHER BZIP TRANSCRIPTION FACTOR 44 8 152 - -
Lapu11g00777 154 Gene3D - 29 84 - -
Lapu11g00777 154 SUPERFAMILY Leucine zipper domain 31 83 IPR046347 GO:0003700|GO:0006355
Lapu11g00777 154 MobiDBLite consensus disorder prediction 25 52 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu11g00777 Lapu-Chr11 10636367 10637865 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu11g00777 25 154 bZIP Transcription Factor Family AT4G34590 57.554 2.29e-49 154
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Lapu11g00777 bZIP_1 2.9e-10 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu11g00777 K25786 - gmx:100101862 246.514
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu11g00777 11 10636367 10637865 Lapu11g00777 11 10636367 10637865 ECH