Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu11g00771 ATGGCTCCAAAGAAGGATAAGGCTCCTCCACCTTCCTCCAAGCCCGCCAAATCTGGCGGTGGCAAGCAGAAGAAGAAGAAGTGGAGCAAGGGAAAGCAGAAGGAGAAGGTGAACAACATGGTTCTGTTTGATCAGGGCACCTATGACAAGCTCCTATCTGAAGCACCCAAATACAAGCTCATCACTCCTTCCATTCTCTCTGATCGTTTGAGGATTAATGGATCACTTGCAAGGAAGGCTATAAGAGAACTGATGGCTAGAGGTTCAATCAGGATGGTGTCTGCCCATGCAAGTCAGCAAATTTACACCAGGGCCACAAACACCTAA 327 0.4801 MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLSEAPKYKLITPSILSDRLRINGSLARKAIRELMARGSIRMVSAHASQQIYTRATNT* 109
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu11g00771 108 Pfam S25 ribosomal protein 7 105 IPR004977 -
Lapu11g00771 108 Gene3D - 21 108 - -
Lapu11g00771 108 MobiDBLite consensus disorder prediction 1 36 - -
Lapu11g00771 108 PANTHER 40S RIBOSOMAL PROTEIN S25 1 108 IPR004977 -
Lapu11g00771 108 FunFam 40S ribosomal protein S25 21 108 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu11g00771 Lapu-Chr11 10584702 10587560 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu11g00771 1 107 Cytoplasmic Ribosomal Protein Gene Family AT4G34555 92.523 1.37e-55 166
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu11g00771 K02975 - gmx:100499810 162.155