Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu11g00757 ATGGCCTCAAGCTCTCTCAGCAAACAAAAGCCTTCTGACTCCTCTTGGACACCAAAACAGAACAAGCTGTTTGAAAAAGCACTTGCAAAGTATGACAAAGATACCCCTGACCGGTGGCAGAATGTGGCCACAGCAGTAGGTGACAAATCTCCAGATGAGGTTAAGAGACACTATGAAATCCTCTTGGAGGATCTCAGACACATAGAGTCTGGCCGTGTTCCTCTTCCCAAATACAGGTCCACAGGAAGCAGCACCAATGTTGATGATGAAGAGAGACTCCTGAAGTATCTTAAGCTGAATTGA 303 0.4587 MASSSLSKQKPSDSSWTPKQNKLFEKALAKYDKDTPDRWQNVATAVGDKSPDEVKRHYEILLEDLRHIESGRVPLPKYRSTGSSTNVDDEERLLKYLKLN* 101
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu11g00757 100 ProSiteProfiles Myb-like domain profile. 8 62 IPR001005 -
Lapu11g00757 100 FunFam Transcription factor SRM1 8 75 - -
Lapu11g00757 100 MobiDBLite consensus disorder prediction 1 20 - -
Lapu11g00757 100 CDD SANT 15 62 IPR001005 -
Lapu11g00757 100 ProSiteProfiles SANT domain profile. 11 66 IPR017884 -
Lapu11g00757 100 PANTHER MYB FAMILY TRANSCRIPTION FACTOR-RELATED 1 86 IPR044636 GO:0003700
Lapu11g00757 100 Pfam Myb-like DNA-binding domain 14 58 IPR001005 -
Lapu11g00757 100 SMART sant 12 64 IPR001005 -
Lapu11g00757 100 Gene3D - 7 75 - -
Lapu11g00757 100 SUPERFAMILY Homeodomain-like 14 70 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu11g00757 Lapu-Chr11 10502634 10504152 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Lapu11g00757 Myb_DNA-binding 3.4e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu11g00757 - - gmx:100798314 184.882
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu11g00757 11 10502634 10504152 Lapu11g00757 11 10502634 10504152 ECH