Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu11g00756 ATGGCTGCTGCTGATGTTGAGTTCCGATGCTTCGTCGGTGGGCTTGCATGGGCCACCGACGGCAGTTCCCTGGAGAAGGCCTTTTCTGTATATGGCGAAATCCTTGAATCGAAGATTATCAACGATCGTGAGACTGGAAGGTCTAGGGGCTTCGGATTCGTGACATTCGCCACGGAGCAGTCCATGAGAGATGCAATTGAGGGGATGAACGGCCAAGAACTTGACGGTCGTAACATCACTGTGAACGAAGCTCAGTCCCGCGGTGGAGGCGGAGGTGGTGGCCGTGGTGGTGGTGGTTATGGAGGCGGCGGTGGATATAACCGAGGTGGTGGCGGTGGATACGGTGGCGGAGGATACGGTGGTGGTGGTGGTGGATACGGTGGGGGTCGTCGTGAAGGAGGATACAACCGCAACGGAGGTGGAGGCTATGGAGGAGGTGGTGGTTATGGAGGTGGCAGGGACCGTGGTTACGGCGGTGATGGTGGTTCCCGTCACTCTCGTGGCGATGGAGGAGATGGTAGCTGGAACTAG 531 0.58 MAAADVEFRCFVGGLAWATDGSSLEKAFSVYGEILESKIINDRETGRSRGFGFVTFATEQSMRDAIEGMNGQELDGRNITVNEAQSRGGGGGGGRGGGGYGGGGGYNRGGGGGYGGGGYGGGGGGYGGGRREGGYNRNGGGGYGGGGGYGGGRDRGYGGDGGSRHSRGDGGDGSWN* 177
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu11g00756 176 Gene3D - 2 107 IPR012677 -
Lapu11g00756 176 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 8 86 IPR000504 GO:0003723
Lapu11g00756 176 SMART rrm1_1 9 82 IPR000504 GO:0003723
Lapu11g00756 176 MobiDBLite consensus disorder prediction 122 176 - -
Lapu11g00756 176 PANTHER GLYCINE-RICH RNA-BINDING PROTEIN RZ1A 5 159 - -
Lapu11g00756 176 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 11 79 IPR000504 GO:0003723
Lapu11g00756 176 CDD RRM2_NsCP33_like 9 84 - -
Lapu11g00756 176 MobiDBLite consensus disorder prediction 82 101 - -
Lapu11g00756 176 SUPERFAMILY RNA-binding domain, RBD 8 144 IPR035979 GO:0003676
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu11g00756 Lapu-Chr11 10496563 10498606 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu11g00756 2 88 Eukaryotic Initiation Factors Gene Family AT2G23350 32.955 3.64e-06 44.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu11g00756 - K13195 ccaj:109800369 157.532
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu11g00756 11 10496563 10498606 Lapu11g00756 11 10496563 10498606 ECH