Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu11g00755 ATGCCCCACGATGAGAAAGTGAAGGTTTTGGAGCTTTCTCTCGTCAAGAAAAGGATCCCTCAGTTCCCCGGTTCCATCTACGCTCAATCTCCTAGCGACTCCGATGTGGGTTCTTCTCTGCCCCCTATCCGCACTCTCCTTCAATCAGGTGCTGATAAAAACGAGAAGGATGAGGAGGAGGAGGAGATGATAATGCGCGCACTGGAGATTCGCAGGAAGGTCACCGAAGAGGTTTTCAAAGAAGCCATGCGAAAGGGAAAGTTTGGAATCACCTACTCCACCAATTTGACTGGCAGGTTATCCGGTTTTATGGATTGCATCATGATTGAAGCCGCTAACTTGAAAAGATTGCCCGCGTTTTCAAACTCTACCTTCAATTTACGCGCCAAAACTGTCATTGATGACTCTAAAGTTGTGCCACTTATTAGATGGTTGAAGCATAATGCACTGTCGTATCCTCGGATAGCGAAGATCATTTTGATGTCAAGAGGAAAACCTGAGGCCATAAGAAGTTTTGTCATGTGGTTGAAATCGGTACGTGTGAAAGGCGAGTTTCTCGGTGTTGTAATGTTGAAGGCTGGAGAGAATATTTTGCAGCGCAGACATGAGGAGCTGGATGAGATTGTTCTGTATTTGGAGTCCAATGGGGTAAGGAGGGAATGGATGGGTTACGTCATTAGTCGTTGTCCTCAGTTATTGTCTTACAGCTTAGAAGAAGTGAAGACTCGTGCACATTTCTTCCTAGACATGGGTTTAAATGAGAAGGATTTTGGTACAATGGTTTTTGATTTTCCTAGAGTTCTTGGTTACTATTCTCTGGAAGAAATGAATGAAAAGGTTAATTACTTAAAAGATTTTGGGCTTCAAATTAAGGATGTTGGCAAATTGCTTGCATTTAGGCCACAATTGATGGCGTGCAGCATTGAGGAACAATGGAAGCCTCTTGTTAAGTATCTGTATTATTATGGGATCACTCGAGATGGCATGAGGAGAATGCTTGTCATTAAACCAATGGTCTTTTGTGCTGACTTGGAGAAGACTATTGTGCCAAAGGTAAAATTTTTTGAGGACATGGGAGTTAGCAATGATGGGATTGGCAGCATGCTTGTGAAGTTTCCACCTCTACTCACTTACAGCCTGCACAAGAAAATTAGACCAGTGGTCATATTCTTGATGACCAAAGCTGGAGTCAGTGAGAAAGATATTGGCAAGGTTGTAGCTCTTGGACCTGAGCTCTTGGGATGCAATATAGTACATAAGCTTGATGTAAATGTAAAATATTTTTTATCACTTGGCATACGTCTTCGGCAATTAGGTGAGATGATTGCTGATTTCCCAATGCTGCTCAGATACAATCCAGATGTCCTTCGTCCCAAGTATATTTATTTGCGAAAATCCATGGTCAGGCCTTTGAAAGATATCATTGAGTTTCCAAGGTTTTTCAGCTATTCTCTTGAGGGTCGAATTATCCCAAGGCACAAGGTTCTAGTGGAGAACCATATTAATATTAAGCTGAGATACATGTTGGCTACCACTGACGAAGAATTCCACAAAACGGTCAAGGGTTTAATTGGAAAGCGCAGCAGATTTGAATACGGTGTCACAAATGAGGATACTACCCATTCCCAATCTCTTGTTACTGAAGACAGCTCTACACCCGTGGGATAA 1668 0.4245 MPHDEKVKVLELSLVKKRIPQFPGSIYAQSPSDSDVGSSLPPIRTLLQSGADKNEKDEEEEEMIMRALEIRRKVTEEVFKEAMRKGKFGITYSTNLTGRLSGFMDCIMIEAANLKRLPAFSNSTFNLRAKTVIDDSKVVPLIRWLKHNALSYPRIAKIILMSRGKPEAIRSFVMWLKSVRVKGEFLGVVMLKAGENILQRRHEELDEIVLYLESNGVRREWMGYVISRCPQLLSYSLEEVKTRAHFFLDMGLNEKDFGTMVFDFPRVLGYYSLEEMNEKVNYLKDFGLQIKDVGKLLAFRPQLMACSIEEQWKPLVKYLYYYGITRDGMRRMLVIKPMVFCADLEKTIVPKVKFFEDMGVSNDGIGSMLVKFPPLLTYSLHKKIRPVVIFLMTKAGVSEKDIGKVVALGPELLGCNIVHKLDVNVKYFLSLGIRLRQLGEMIADFPMLLRYNPDVLRPKYIYLRKSMVRPLKDIIEFPRFFSYSLEGRIIPRHKVLVENHINIKLRYMLATTDEEFHKTVKGLIGKRSRFEYGVTNEDTTHSQSLVTEDSSTPVG* 556
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu11g00755 555 Gene3D Transcription termination factor 3, mitochondrial 285 523 IPR038538 -
Lapu11g00755 555 PANTHER CGI-12 PROTEIN-RELATED 197 289 IPR003690 GO:0003690|GO:0006355
Lapu11g00755 555 SMART mt_12 330 361 IPR003690 GO:0003690|GO:0006355
Lapu11g00755 555 SMART mt_12 366 398 IPR003690 GO:0003690|GO:0006355
Lapu11g00755 555 SMART mt_12 294 325 IPR003690 GO:0003690|GO:0006355
Lapu11g00755 555 SMART mt_12 471 502 IPR003690 GO:0003690|GO:0006355
Lapu11g00755 555 SMART mt_12 223 253 IPR003690 GO:0003690|GO:0006355
Lapu11g00755 555 SMART mt_12 439 470 IPR003690 GO:0003690|GO:0006355
Lapu11g00755 555 SMART mt_12 403 434 IPR003690 GO:0003690|GO:0006355
Lapu11g00755 555 SMART mt_12 258 289 IPR003690 GO:0003690|GO:0006355
Lapu11g00755 555 Pfam mTERF 154 285 IPR003690 GO:0003690|GO:0006355
Lapu11g00755 555 Pfam mTERF 281 516 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu11g00755 Lapu-Chr11 10487116 10490963 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Lapu11g00755 mTERF 1.6e-51 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu11g00755 K15032 - mnt:21401514 802.357
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu11g00755 11 10487116 10490963 Lapu11g00755 11 10487116 10490963 ECH