Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu11g00738 ATGACGGAGGGAAGGGTAGTTGAAGCTCCCAGAACACTTGAGGATTTCAATCCTCCTAAGAAGCCCAAGAGAAACAAGTATGCTTTTGGTTGCGCTGTGTTGGCCTCCATGACATCCATTTTACTTGGCTATGATATTGGGGTCATGAGTGGTGCAGCGATATACATAAAGAGGGACCTAAAGGTGTCAGACGTGCAAATCGAGATACTGCTTGGAATCATCAACCTCTACTCTCTGCTAGGGTCGTGTTTGGCCGGCAGAACCTCCGACTGGATAGGGCGGCGATACACCATTGTCTTCGCCGGCACAATCTTCTTCGCCGGAGCAATTCTGATGGGCTTCTCACCCAACTATTCCTTTCTGATGTTCGGGCGTTTCGTGGCGGGCGTCGGCATCGGGTACGCGCTCATGATCGCCCCTGTCTACACCGCCGAAGTCTCCCCAGCCTCGTCGCGTGGCTTCCTCACTTCCTTTCCCGAGGTTTTTATCAATGGAGGGATATTGCTGGGATACATATCGAACTACGCATTTTCAAAGATGTCGCTGAAGTTGGGATGGCGAATGATGCTTGGAGTGGGTGTAGTTCCTTCGGTACTCCTAACATTGGGAGTGCTGGCGATGCCTGAATCTCCGCGGTGGCTGGTGATGAGGGGGCGTTTGGGAGAGGCAACGAAAGTGCTTAACAAAACCTCGGACACGAAGGAAGAAGCTCAACTGAGGCTAGCCGAGATCAAACAAGCCGCGGGGATCCCGGAGGATTGCAACGACGAAGTCGTGCAGGTAACGAAGCGAAACACGGGCGAGGGTGTATGGAAAGAGTTGTTCCTGTATCCAACGCCGGCGGTTCGTCACATCTTGATTGCAGCCCTCGGGATTCACTTCTTCCAACAAGCGTCGGGCGTGGACGCCGTGGTCTTATACAGCCCCACGATCTTCGAGAAGGCTGGGATCACCGATGACACACAAAAGCTTCTTGCAACCGTGGCCGTTGGATTCGTGAAGACGATGTTCATCTTGGTTGCCACTTTTATGTTGGATCGCGTGGGTCGTCGTCCCTTGTTATTGTCTAGTGTGGGGGGCATGGTGCTCTCGCTTCTCACACTGGCTATCAGCCTTACCATCATTGATCACTCAAAGAGTAAGCTGATCTGGGCCATTGGATTGAGCATATCGATGGTGTTAGCCTACGTGGCGACGTTTTCCATCGGTGCGGGACCCATCACGTGGGTCTACAGCTCTGAGATCTTTCCATTGAGGTTGCGGGCGCAGGGTGCGGCTGCGGGTGTTGTTGTGAACAGAACCACAAGTGGGGTTGTTTCAATGACGTTTTTGTCCCTCACCAAAGCCATCACTATCGGTGGAGCTTTCTTCCTCTATTGTAGCATTGCTGCGGTTGGGTGGTTATTCTTCTACACTGTTCTTCCAGAGACACGAGGTAAAACACTTGAAGACATGGAAGGGTCTTTCGGTAATTTCAGAGCCAAATCCCACACCAATAATGGAGTAGAAAATGGAAATCCCAAAGCGCCACAACTTCAGCTGGGGACCAATCTCCACACTTAG 1563 0.5189 MTEGRVVEAPRTLEDFNPPKKPKRNKYAFGCAVLASMTSILLGYDIGVMSGAAIYIKRDLKVSDVQIEILLGIINLYSLLGSCLAGRTSDWIGRRYTIVFAGTIFFAGAILMGFSPNYSFLMFGRFVAGVGIGYALMIAPVYTAEVSPASSRGFLTSFPEVFINGGILLGYISNYAFSKMSLKLGWRMMLGVGVVPSVLLTLGVLAMPESPRWLVMRGRLGEATKVLNKTSDTKEEAQLRLAEIKQAAGIPEDCNDEVVQVTKRNTGEGVWKELFLYPTPAVRHILIAALGIHFFQQASGVDAVVLYSPTIFEKAGITDDTQKLLATVAVGFVKTMFILVATFMLDRVGRRPLLLSSVGGMVLSLLTLAISLTIIDHSKSKLIWAIGLSISMVLAYVATFSIGAGPITWVYSSEIFPLRLRAQGAAAGVVVNRTTSGVVSMTFLSLTKAITIGGAFFLYCSIAAVGWLFFYTVLPETRGKTLEDMEGSFGNFRAKSHTNNGVENGNPKAPQLQLGTNLHT* 521
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu11g00738 520 ProSiteProfiles Major facilitator superfamily (MFS) profile. 31 478 IPR020846 GO:0022857
Lapu11g00738 520 PRINTS Sugar transporter signature 390 411 IPR003663 GO:0016020|GO:0022857|GO:0055085
Lapu11g00738 520 PRINTS Sugar transporter signature 122 141 IPR003663 GO:0016020|GO:0022857|GO:0055085
Lapu11g00738 520 PRINTS Sugar transporter signature 296 306 IPR003663 GO:0016020|GO:0022857|GO:0055085
Lapu11g00738 520 PRINTS Sugar transporter signature 39 49 IPR003663 GO:0016020|GO:0022857|GO:0055085
Lapu11g00738 520 PRINTS Sugar transporter signature 413 425 IPR003663 GO:0016020|GO:0022857|GO:0055085
Lapu11g00738 520 Pfam Sugar (and other) transporter 31 487 IPR005828 GO:0016020|GO:0022857|GO:0055085
Lapu11g00738 520 Gene3D MFS general substrate transporter like domains 21 491 IPR036259 -
Lapu11g00738 520 Coils Coil 227 247 - -
Lapu11g00738 520 MobiDBLite consensus disorder prediction 496 520 - -
Lapu11g00738 520 ProSitePatterns Sugar transport proteins signature 1. 85 102 IPR005829 GO:0016020|GO:0022857|GO:0055085
Lapu11g00738 520 CDD MFS_PLT 34 485 IPR044776 GO:0005351
Lapu11g00738 520 PANTHER SOLUTE CARRIER FAMILY 2, FACILITATED GLUCOSE TRANSPORTER 26 491 IPR045262 GO:0015144
Lapu11g00738 520 NCBIfam sugar porter family MFS transporter 24 484 IPR003663 GO:0016020|GO:0022857|GO:0055085
Lapu11g00738 520 FunFam probable polyol transporter 4 21 492 - -
Lapu11g00738 520 ProSitePatterns Sugar transport proteins signature 2. 127 152 IPR005829 GO:0016020|GO:0022857|GO:0055085
Lapu11g00738 520 SUPERFAMILY MFS general substrate transporter 17 486 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu11g00738 Lapu-Chr11 10358919 10361674 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu11g00738 3 517 Organic Solute Cotransporters AT3G18830 68.893 0.0 749
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu11g00738 11 10358919 10361674 Lapu5g00266 5 2177562 2181241 PCT