LGRPv2

Show entries

Search:

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lapu11g00701	ATGACTAGTGGTGCCAAGAAATACCCTCACTTCTTCAAAATCTTCCTTCCAGAGCAACATTCTTCCATAATGAAAGTTCCAAACGAGTTTTTGAAGCATTTGAATGAAGACTTGTCCAGTAATGCAGTTCTTAGTGGCCCTTCTTCTGAGGACCAGTGGCAAGTAACAGTTCTGAAGAAAGGAAATGACATGTATATGCAAAATGGTTGGCCACAATTTGTGACAGACAACTCAGTGATGCTTCATGAGTTCTTGCTTTTTACATATCATGGAGAAAACTGCTTCCATGTACAAATTTTTGGTAAGGATGGATTGGAGAGGTTATGCCTCAAAGAAACAAGACAAGAACAAGCTACCATCCCAAAGAAGTGTACACAAACTTTTGCCGGTTCATTCCTCCATAAATCCAAGTCTTGTAAAAAAGATATGCCTTTCAGAAACAAAGGCTCACTTTCTACTGGATGTGAGACAGAGAAAAGAAGACAAGAACAAACTGCCACCCCAAGTTTGGCAAGGACAAAGAAGAATAAAGAAAGAAATTTTTTTCCTGGTCCATCACACCTCCATGAATCGAAGTCTTATCAAGAAGATTTGTTCTTAAGCAACAAAGCCTCTCTTTTGAAGGACTTCCCAACACCTAAGCATTCAATTGAAAGTTCAGAAGCATGGAAATTGGCCGAGTCTTTTATTACCTCTTGCAATCCTCATTGGAAGCACCTCATGACAAAATCTAATGTGGAAGATCGTTGCGTATTGCCTATTGCTACTGAGTTTGCTAGAAAGTATATTCCTGAAGCAGTCAAACAGATCCAAATTGTAAATTCCGAAGGAACATTTTGGAAAGTGCAAGTGAGTTGTTTCAAAAATCAAAATAGAAGATATGCTCAGTTAACCACAGGATGGGAAAGTTTCGTTCGTGATAACAAGCTCATGAGAGGTGACACTTGCATATTTGAACTTGAAGAAGACTTCCATTTGAGGGTTCACATATTCAGAACCAGATTTGCACCAAATTAA	1017	0.3864	MTSGAKKYPHFFKIFLPEQHSSIMKVPNEFLKHLNEDLSSNAVLSGPSSEDQWQVTVLKKGNDMYMQNGWPQFVTDNSVMLHEFLLFTYHGENCFHVQIFGKDGLERLCLKETRQEQATIPKKCTQTFAGSFLHKSKSCKKDMPFRNKGSLSTGCETEKRRQEQTATPSLARTKKNKERNFFPGPSHLHESKSYQEDLFLSNKASLLKDFPTPKHSIESSEAWKLAESFITSCNPHWKHLMTKSNVEDRCVLPIATEFARKYIPEAVKQIQIVNSEGTFWKVQVSCFKNQNRRYAQLTTGWESFVRDNKLMRGDTCIFELEEDFHLRVHIFRTRFAPN*	339

Showing 1 to 1 of 1 entries

Show entries

Search:

Seq ID	Length	Analysis	Description	Start	End	IPR	GO
Lapu11g00701	338	SUPERFAMILY	DNA-binding pseudobarrel domain	233	334	IPR015300	-
Lapu11g00701	338	SUPERFAMILY	DNA-binding pseudobarrel domain	7	104	IPR015300	-
Lapu11g00701	338	CDD	B3_DNA	9	100	IPR003340	GO:0003677
Lapu11g00701	338	Gene3D	-	216	334	IPR015300	-
Lapu11g00701	338	Gene3D	-	3	104	IPR015300	-
Lapu11g00701	338	ProSiteProfiles	B3 DNA-binding domain profile.	237	334	IPR003340	GO:0003677
Lapu11g00701	338	MobiDBLite	consensus disorder prediction	172	188	-	-
Lapu11g00701	338	Pfam	B3 DNA binding domain	11	102	IPR003340	GO:0003677
Lapu11g00701	338	Pfam	B3 DNA binding domain	240	333	IPR003340	GO:0003677
Lapu11g00701	338	PANTHER	B3 DOMAIN-CONTAINING	6	322	-	-

Showing 1 to 10 of 15 entries

Show entries

Search:

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lapu11g00701	Lapu-Chr11	10079922	10084893	Tandem

Showing 1 to 1 of 1 entries

Show entries

Search:

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lapu11g00701	9	333	B3 DNA Binding Superfamily	AT3G18990	25.937	2.72e-23	97.4

Showing 1 to 1 of 1 entries

Show entries

Search:

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	B3	Lapu11g00701		B3	1.7e-18	CL0405

Showing 1 to 1 of 1 entries

Show entries

Search:

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Lapu11g00701	-		-	pvu:PHAVU_011G050700g	565.459

Showing 1 to 1 of 1 entries