Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu11g00679 ATGGATAGAGACGAAGACAACAAATCCCCTCCTCTGCCACCTTCATCTTCCTCATCCCAACCTTTCAGCCACGACATCATCGGAATGCCCGATAATCCACCCAAAAACAGGGGCCATAGACGCGCCCATTCCGAGATTATCACCCTTCCCGAGGACCTCACCTTCGACACTGATCTCGCCCTCGATGATGACTTCCTCGCCCTCGTAGATCATCTCAATTCCCCTCCGTTGCCTCAAGACAACAACAATATCATCGACAACAACAATAACAGCAACAGCAGCAGCAACAATAACGATAACAACGTTGGTAATCAGAGGCCGAGGGTTAGACACCAGCATAGCCACTCCATGGATTTGTCCATCCAGCCGGAGATGCTGGTCTCCGGCGCCGATGACGTGTCAGGCGTTGATGCCAAAAAGGCTATGTCGGCTGACAAGCTTGCTGAGCTTGCCTTAATTGATCCCAAGCGAGCTAAAAGCATTGCGATATGGGCAAACAGACAGTCTGCTGCAAGATCGAAAGAAAGGAAGATGCGTTACATTTCCGAGCTTGAAAGGAAAGTGCAGACATTGCAAACAGAAGCGACATCCTTGTCTGCACAATTAACTCTCTTGCAGAGAGATACAAACGGACTGAATGCTGAGAATGGTGAGTTGAAGTTGCGGTTGCAAACGATGGAGCAACAGGTTCACTTGCAAGATGCATTAAATGAGGCATTAAAAGAAGAAATTCAGCATTTGAAATTAATGACTGGACAAGCCATTCCAAATGGAGGAGGACCTACAAACTTTTCTTCATTTGGTGGGGGGCAACAATTCTATCCCAACAATCAGGCCATGTACACTCTTTTAGCTGCACAAAAGTTTCAACAACTTCAAATTCAATCCCAAAAGCAGCAACAGCATCAACTTCAACAGCAACAACAACAGTTTCAGCAACATCAACTTCAGCAGCGACAACAACAGTTTCACCAGCATCAACTACAACAACAACAACAGCAACAGCAGCAACAAACAACAGCAACAGCTACTGTAACATCAACAAATGGGGGACTTGAATAG 1062 0.4623 MDRDEDNKSPPLPPSSSSSQPFSHDIIGMPDNPPKNRGHRRAHSEIITLPEDLTFDTDLALDDDFLALVDHLNSPPLPQDNNNIIDNNNNSNSSSNNNDNNVGNQRPRVRHQHSHSMDLSIQPEMLVSGADDVSGVDAKKAMSADKLAELALIDPKRAKSIAIWANRQSAARSKERKMRYISELERKVQTLQTEATSLSAQLTLLQRDTNGLNAENGELKLRLQTMEQQVHLQDALNEALKEEIQHLKLMTGQAIPNGGGPTNFSSFGGGQQFYPNNQAMYTLLAAQKFQQLQIQSQKQQQHQLQQQQQQFQQHQLQQRQQQFHQHQLQQQQQQQQQQTTATATVTSTNGGLE* 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu11g00679 353 MobiDBLite consensus disorder prediction 75 107 - -
Lapu11g00679 353 MobiDBLite consensus disorder prediction 75 117 - -
Lapu11g00679 353 Coils Coil 174 243 - -
Lapu11g00679 353 CDD bZIP_plant_RF2 163 208 IPR044759 GO:0003700|GO:0006355
Lapu11g00679 353 MobiDBLite consensus disorder prediction 1 41 - -
Lapu11g00679 353 SUPERFAMILY Leucine zipper domain 163 209 IPR046347 GO:0003700|GO:0006355
Lapu11g00679 353 Gene3D - 157 210 - -
Lapu11g00679 353 MobiDBLite consensus disorder prediction 326 353 - -
Lapu11g00679 353 FunFam probable transcription factor PosF21 155 210 - -
Lapu11g00679 353 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 166 219 IPR004827 GO:0003700|GO:0006355
Lapu11g00679 353 Coils Coil 294 317 - -
Lapu11g00679 353 SMART brlzneu 152 218 IPR004827 GO:0003700|GO:0006355
Lapu11g00679 353 PANTHER TRANSCRIPTION FACTOR POSF21-RELATED 8 342 - -
Lapu11g00679 353 Pfam bZIP transcription factor 166 212 IPR004827 GO:0003700|GO:0006355
Lapu11g00679 353 MobiDBLite consensus disorder prediction 10 25 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu11g00679 Lapu-Chr11 9920922 9927159 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu11g00679 10 286 bZIP Transcription Factor Family AT1G06070 62.013 1.95e-120 352
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Lapu11g00679 bZIP_1 5.6e-07 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu11g00679 - - vun:114169967 439.499