Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu11g00673 TGTTCTGCTGTTCTCTCTGTAGCACGGAACAGAGGATTAAAAATAATTAGCGGCATCACACACCCTTTCTGCCACAATCCAATTTTCATGGAGTTTGAGATTGATGGTACTGGCGAGACAGTAGCAAATGCTGGTATAGGCGAGGAATGTTCTGCTGAACCAAACTACAAAGAAGATGAAGGTGATAATGCTCCTCGAGATTCCTCTGGAGGGATCACTATCCCATTTGCAATTCCCACAGTATCAGTTGTTGCGGTTGAAGAGCCCTATGTGGGTCAGGAGTTTGAATCAGAATCAGCAGCACACGCATTTTATAATGCATATGCCACAGATGTTGGATTCATCGTGCGTGTGAGTAAACTATCGCGATCAAGGCGTGATGGAACTGCTATTGGACGTGCGCTTGTTTGCAACAAAGAAGGTTTCAGAATGCCTGACAAGCGTGAAAAGATTGTGAGGCAAAGGGCTGAGACCAGGGTTGGTTGCAGGGCAATGATTATGGTGAGGAAAGTTAGTTCTGGCAAATGGGTTGTTACAAAGCTTGTAAAGGAACACACACATCCTTTGACTCCTGGTAAAGGTAGAAGGGATTTCGTTTATGAACAATATCCGAATGAACATGACAAAATTCGGGAACTATCTCAGCAGTTGGCAACTGAGAAAAAGCGATCTGCAACCTATAAAAGACATCTTGAACTGATATTTGAGCACATTGAAGAGCATAACGAGAGTCTTTCAAAGAAAATACAGCACATAGTGGACAAGGTGAGGGCGTTGGAAAGCAAAGAACAACAGAGTGAACTCTGA 807 0.4349 CSAVLSVARNRGLKIISGITHPFCHNPIFMEFEIDGTGETVANAGIGEECSAEPNYKEDEGDNAPRDSSGGITIPFAIPTVSVVAVEEPYVGQEFESESAAHAFYNAYATDVGFIVRVSKLSRSRRDGTAIGRALVCNKEGFRMPDKREKIVRQRAETRVGCRAMIMVRKVSSGKWVVTKLVKEHTHPLTPGKGRRDFVYEQYPNEHDKIRELSQQLATEKKRSATYKRHLELIFEHIEEHNESLSKKIQHIVDKVRALESKEQQSEL* 269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu11g00673 268 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 70 264 - -
Lapu11g00673 268 Pfam FAR1 DNA-binding domain 104 190 IPR004330 -
Lapu11g00673 268 Coils Coil 242 262 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu11g00673 Lapu-Chr11 9881007 9884029 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Lapu11g00673 FAR1 2e-30 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu11g00673 - - pvu:PHAVU_011G054000g 466.848