LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lapu11g00671	ATGGGGATCTCACTAAAACATCAATTATTAAAGGTGAAGCCATGTTCGGTTAGGCTTCTATTTGAGCTGGTGGTTTTATCATACTTGTGGTTACAAGTTACAAGCCTTGGTTCCATGTCATCCATTGCCATCTCATACGGCGAAAAGGGTTCTGTGTTTTGTGGTTTGAAATCTGATGGCTCTCACACAGTGACATGTTATGGATCCAACTCAGCCATAACCTATGGAACACCAGCCCATTTCTCATTTCTTGGTCTAACAGCTGGAGATGGCTTTGTCTGTGGGCTTCTAATGGGTTCCAATCAACCGTACTGCTGGGGTAGCAGTGGCTACATTGAAATGGGAGTGCCTCAACCTATCATCAAAGGAGCACAGTACCTAGAAATCAGTGCCGGAGATTACCATGTTTGTGGCTTGAGGAAACCTTTGACCGGAAGGCACAGGTACATTTCCTTGGTTGATTGCTGGGGCTACAACATGACCAAAAACTATCTGTTCGGGGGACAAATTGAATCAATCACAGCTGGTTCTGAATTCAATTGTGGTCTTTTTTCTCAGAACAGGACTGTGTTATGCTGGGGTGATGAGACTAATAGCCTGGTGATTAGTTTGATTCCACAAGACATAAGATTCCAGAAAATTTCAGCTGGTGGGTATCATGTGTGTGGAATATTAGAGGGAGTGAATTCCAAGACTGTTTGTTGGGGAAGAAGCTTGAACCTTGGGGAAGAAATTTCAGTGGCACATGCAGGCCAAGGAAACGTTGATTTGGCTCCAAATGATCCCATGATTTCTGTAGTGGGAGGGAAGTTCCATGCATGTGGCATTAAGAGCTATGATCGTGGAGTGATTTGTTGGGGCTTTATCATCAAACAAAGCACTCCCTCTCCTAGAGGGATTAAGGTTTTTGAAGTTGCAGCTGGTGATTACTTTACTTGTGCAGTTCTTGCTGAGAAATCTCTTATGCCTTCATGTTGGGGAGTTGATTTTCCCACCTCACTTCCTTTAGCTGTTTCACCAGGAATGTGTCAACCTGCTCCATGCCCTCCTGGTTCCTATGCCATTGATCAGCACAAAGCTCTCTGCAAATCACCGGATTCTCGTGTTTGCATGCGTTGCAGTGGTGCTTGTCCTCCTGAAATGTATCAGAAGAGTGCATGCAATTTGGCCTCTGATAGACTATGTGAATATAACTGTGCCTCTTGTTCTTCATCCGAATGCTTCTTGAACTGCTCGTCTTCATATTCCAATGCTTCCACTGACAAGAAAACTGAAAAGTTTTGGGCTTTGCAGTTGCCAGTTGTCATTGCTGAGATTGCTTTTGCAGTTTTCATAGTTAGTGTCGTGTCAATAACTGCAGTTTTATACGTCCGCTACAAGCTAAGAGATTGTGAGTGTTCAAAAGGGTCACGGGGGAAGAAACTCAACGGGAGTTCTTCCCTGCAAAACGAGAATAAGGTCAGGCCAGACTTGGAGGAGTTCAAAATCAGAAGGGCTCAAATGTTCACCTATGAGGAACTAGAAAGTGCAACTTGTGGATTCAAGGAAGAGTCCATAGTGGGGAAGGGGAGTTTCTCGTGTGTGTTCAAGGGAGTGTTGAAAGATGGGACAGTTGTTGCTGTCAAAAGGGCAATAGTGTCTCCCAACATGCAGAAGACTTCCAAGGAGTTTCACACTGAACTTGACTTGCTCTCAAGGTTGAACCACGCTCATTTGCTCAACCTTCTAGGCTATTGTGAAGAAGGTAGAGAGAGACTTCTTGTGTATGAATTCATGGCTCATGGCTCTTTGCACCAACACTTTCATGGGACAAACCAAGTGTTGAGAGAACAGTTAAATTGGATAAGAAGGGTGACTATTGCAGTACAAGCAGCACGGGGAATTGAATATTTGCATGGCTACGCTTGCCCTCCTGTGATTCACAGAGACATCAAGTCCTCAAACATTCTCATTGATGAAGAGCACAATGCAAGAGTGGCTGATTTTGGTTTATCATTGTTAGGTCCTGCAGATAGTGGCTCACCACTGGCTGAACTCCCAGCAGGGACTCTTGGCTATCTTGATCCTGAATACTATAGGCTTCATTACCTCACAACCAAATCAGATGTCTACAGTTTTGGTGTTCTGCTTTTGGAGATTCTAAGTGGTAGAAAAGCCATTGACATGCAATATGAAGAAGGGAACATAGTGGAATGGGCAGTGCCTCTTATCAAGTCAGGAGATATAACAGCAACTTTGGACCCAGTTTTGAAACCCCCTCCTGATCTGGAAGCCTTGAAGAGAATAGCCAATGTGGCTTGTAAGTGTGTGAGGATGAGAGGGAAAGAGAGACCTTCAATGGATAAAGTGACAACAGCTTTGGAGAGAGGTCTTGCACAGTTAATGGGCAGTCCATGCATTGAGCAGCCTATTTTGCCCAGTGAGGTGGTTTTGGGAAGCAACAGATTGCACAAGAAATCATCTCAAAGATCCTCAAACAGGTCAAATTCTGAGACTGATGTGGTAGAAGCTGAGGACCAAAGGTTTGAGTTCAGGGCACCCTCATGGATTACTTTCCCCAGTGTGACATCTTCTCAAAGGAGAAAGTCATCAGTGTCTGAGGTAGATGTTGATGGGAAGCATAATGCAGAAGGGAAGAACTTTGGCAATGTTGGAGGTGATGTTTTGAGAAGCCTTGAGGAAGAGATTGGTCCTGCTTCTCCAGGAGAGAGGCTGTTCTTGCAGCACAATTTCTAA	2736	0.4448	MGISLKHQLLKVKPCSVRLLFELVVLSYLWLQVTSLGSMSSIAISYGEKGSVFCGLKSDGSHTVTCYGSNSAITYGTPAHFSFLGLTAGDGFVCGLLMGSNQPYCWGSSGYIEMGVPQPIIKGAQYLEISAGDYHVCGLRKPLTGRHRYISLVDCWGYNMTKNYLFGGQIESITAGSEFNCGLFSQNRTVLCWGDETNSLVISLIPQDIRFQKISAGGYHVCGILEGVNSKTVCWGRSLNLGEEISVAHAGQGNVDLAPNDPMISVVGGKFHACGIKSYDRGVICWGFIIKQSTPSPRGIKVFEVAAGDYFTCAVLAEKSLMPSCWGVDFPTSLPLAVSPGMCQPAPCPPGSYAIDQHKALCKSPDSRVCMRCSGACPPEMYQKSACNLASDRLCEYNCASCSSSECFLNCSSSYSNASTDKKTEKFWALQLPVVIAEIAFAVFIVSVVSITAVLYVRYKLRDCECSKGSRGKKLNGSSSLQNENKVRPDLEEFKIRRAQMFTYEELESATCGFKEESIVGKGSFSCVFKGVLKDGTVVAVKRAIVSPNMQKTSKEFHTELDLLSRLNHAHLLNLLGYCEEGRERLLVYEFMAHGSLHQHFHGTNQVLREQLNWIRRVTIAVQAARGIEYLHGYACPPVIHRDIKSSNILIDEEHNARVADFGLSLLGPADSGSPLAELPAGTLGYLDPEYYRLHYLTTKSDVYSFGVLLLEILSGRKAIDMQYEEGNIVEWAVPLIKSGDITATLDPVLKPPPDLEALKRIANVACKCVRMRGKERPSMDKVTTALERGLAQLMGSPCIEQPILPSEVVLGSNRLHKKSSQRSSNRSNSETDVVEAEDQRFEFRAPSWITFPSVTSSQRRKSSVSEVDVDGKHNAEGKNFGNVGGDVLRSLEEEIGPASPGERLFLQHNF*	912

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lapu11g00671	911	Gene3D	Transferase(Phosphotransferase) domain 1	592	795	-	-
	Lapu11g00671	911	FunFam	Serine/threonine-protein kinase-like protein CR4	35	202	-	-
	Lapu11g00671	911	FunFam	serine/threonine-protein kinase-like protein CCR1	484	591	-	-
	Lapu11g00671	911	MobiDBLite	consensus disorder prediction	860	884	-	-
	Lapu11g00671	911	Pfam	Protein kinase domain	514	783	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Lapu11g00671	911	FunFam	Receptor protein kinase CRINKLY4	592	794	-	-
	Lapu11g00671	911	MobiDBLite	consensus disorder prediction	815	831	-	-
	Lapu11g00671	911	PANTHER	SERINE/THREONINE-PROTEIN KINASE-LIKE PROTEIN ACR4	20	911	-	-
	Lapu11g00671	911	SUPERFAMILY	Protein kinase-like (PK-like)	494	787	IPR011009	-
	Lapu11g00671	911	ProSitePatterns	Protein kinases ATP-binding region signature.	520	542	IPR017441	GO:0005524
	Lapu11g00671	911	ProSiteProfiles	TNFR/NGFR family cysteine-rich region domain profile.	347	395	IPR001368	GO:0005515
	Lapu11g00671	911	Gene3D	-	82	332	IPR009091	-
	Lapu11g00671	911	SMART	serkin_6	514	792	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Lapu11g00671	911	MobiDBLite	consensus disorder prediction	815	837	-	-
	Lapu11g00671	911	Gene3D	Phosphorylase Kinase; domain 1	484	591	-	-
	Lapu11g00671	911	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	639	651	IPR008271	GO:0004672\|GO:0006468
	Lapu11g00671	911	ProSiteProfiles	Protein kinase domain profile.	514	805	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Lapu11g00671	911	SUPERFAMILY	RCC1/BLIP-II	34	288	IPR009091	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lapu11g00671	Lapu-Chr11	9861988	9864742	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lapu11g00671	19	911	Receptor kinase-like Gene Family	AT3G59420	67.778	0.0	1239

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_CR4L	Lapu11g00671		Pkinase	1.2e-42	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Lapu11g00671	-		-	gmx:100797455	1699.87