Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu11g00666 ATGTATCCAAAACGTTCAGACCAAGATGGCCCTGATCTGAGACAGGTGCGCTCCAGTGATAGGATTAAGACAAGGCCTAATATTTATGGCCGACCATACTTGTTTTATAACCAAAATCTTAGGCGTACCAGAAAAAACAAGAACAAGACAAGGACTGCAGCATCACAGATTGCAAAAATGTTGCGTCCAGGAAATCGGAAATCACAAGATTCTAATACTAATTCTGGCTCTGCCAATCTTCGACGTTCGACTAGGAAGAGAAGGCTTAATGTAAATCTTGAAGATTTTACTGACAGTTCTGGAGCTGAAGATGAAGACTTAATGAGACCTACGTATCCCTCGTTGAGAAACAGGATTAAAAATAGAGTCAAACAGGATGGTTTGATGTCTTCTAAGCGCAAAAGAGTAGCAGAGACTAAACAAACACCTCGACGTGAAGGTTTACGTCCTCGTCGTTCGAAGGGTGCTGTGAAAGAACGATTAATTTCAGAATCTGATGATGAGCAAGATCTTTCTGAGGAAAAGGTTGATCAAGATGAAACAGAAAATGGAAATGATGTTGAGGAAAATGATGCAGATGATGTCCAAAATGAGATTGAGGGGGATGCTGAGGGTGAAGATGAAGGTGAGGATGAAGGTGATGAAGATGGTGATGACGAGGAAGGCGAAGAAGAGCAGGATGGGAGAAGGCGATATGATCTTCGGAATCGTTCAGATGTTCGGAGGTTCTCTATGGAGGAAAGGAAGGTTCGGCCTAGATCTCCTCGAAGAGTGTTACATCAAGGTATGGGAACTAAGGTCAGCAGAGATGTAAGGAAAGGTGGATCACGAGTTCATAAGCGTCATCGTTTAGCAAGGCCTGAAGATTCTGATGACTCACTTTTGGTGGATGAGCTGGATCAAGGTCCAGCTGTTTCATGGGGGCGAGGTGGTAACAGATCTGGTCCACCTTGGCTTTTTGGAGGCTTAGACATGCATGGAACAACAGCTTTTGGATTAAATCTTGCTGCATCAGGTTGGGGTCATCAGGGTGATGCTTTGGCTACTCTAACATCAGGTATTCAAACTGCAGGACCAAGCTCTAAGGGTGGGGCAGACATCCAACCCTTGCAGGTTGATGACAGTGTTGGTTTTGATGATATAGGTGGGCTCTCTGAATACATTGATGCTCTAAAGGAAATGGTTTTCTTTCCATTATTATATCCAGATTTTTTTGCCAGTTACCACATAACTCCACCCAGAGGGGTGCTGTTGTGTGGGCCTCCTGGCACAGGGAAAACGTTAATTGCGAGGGCTTTGGCTTGTGCTGCTTCGAAAGCTGGCCAAAAGGTTAGCTTTTACATGCGCAAAGGAGCAGATGTGCTAAGCAAGTGGGTTGGTGAGGCTGAAAGACAATTGAAACTACTCTTTGAGGAAGCGCAGAGGAATCAACCTTCTATTATCTTCTTTGATGAAATAGATGGACTTGCACCTGTGAGGTCTAGCAAGCAAGAACAAATTCACAATTCAATTGTGTCCACTTTGCTTGCTTTAATGGATGGTCTTGACTCTCGTGGGCAAGTTGTTTTAATTGGTGCTACCAACAGGATTGATGCCATTGATGGAGCCTTACGACGTCCTGGTAGATTTGATCGCGAGTTTAACTTTCCCTTACCTGGTTGTGAGGCTCGTGCTGAGATATTAGATATTCATACTCGTAAGTGGAAGCATCCTCCTACAAATGAGCTGAAAAAGGAACTTGCAGCTAGTTGTGTAGGTTACTGTGGTGCTGACCTGAAAGCTCTTTGTACTGAAGCTGCCATCCATGCATTTCGTCAAAAGTATCCACAAGTTTATACGAGTGATGACAAATTTGTCATAGATGTTGATTCTGTCAAGGTAGAAAAGACTCATTTTATTGAAGCGATGTCTACTATTACTCCTGCTGCTCATAGGGGAGCCATTGTGCACTCTAGGCCCTTGTCTCTAGTAGTTCAACCATGTCTCCAGCGACATTTAGAGAAAGCTATGAGTGTTATATCTGATATTTTTCCTCCAGCTTCTATTGCATCAGAGTTGACTAAACTTTCAATGCTTTCCTATGGGTCTGCAATTCCACTTGTGTATCGACCTAGGCTTCTACTTTGTGGTGGTGAAGGTACAGGGCTGGATCATCTTGGCCCTGCTGTTTTACATGAGCTGGAAAAATTTCCTGTACATTCATTAGGACTCCCATCTCTTCTGTCAGATCCCAGTGCAAAGACACCAGAAGAGGCATTAGTACATATATTTGGTGAAGCTAGAAGAACAACACCATCGATTCTCTATTTACCACAGTTTGATGTTTGGTGGGAGACTGCTCATGAACAGCTCAGGGCTGTTCTCTTGACTTTGCTGGAAGAATTGCCTTCTGATTTGCCTATCTTAGTGCTTGGTACATCCTCTGTTGCACTTGCTGAAGTTGAGGAAGTGCCCACTTCAGTTTTCCCTCACCGCGCAATTTATCAAGTGAATATGCCATGTGCCAAAGATAGGACTTTGTTTTTCAATCTTTTGATAGAAGCTGCTATGTCAATATTGTTGGAGGGAATCAAGAAATCACAAGATACAGGATACATCCCTGAACTTCCTAAGGCACCGAAATTGGCTAGTGGTCCAAAAGTATCTGAGCTAAAAGCAAAGGTGGAATCTGAGCAACATGCACTTCGTAGGTTACGAATGTGCCTTAGAGATATTTGCAACCGGATACTTTATGACAAAAGATTTAATGCCTTCCATTATCCAGTGTCAGACGAAGATGCACCAAATTATCGGTCAATTATACAGAACCCAATAGACATGGCTACCATCCTTCAGCATGTTGATAATGGCCAATATATTACATGTGCTGCATTCATGCAGGATATCAATCTTATTGTTTCCAATGCAAAGGCCTACAATGGAGAGGATTACAACGGTGCTAGGATTGTCAGTAGAGCTTGTGAGCTCCGTGATGCGGTGCATGGGATGCTCTCACAGATGGATCCTGCACTGATTGCATATTGTGATAAGATTGCAAGTCAAGGTGGCCCAGTTCAGTTGTCTGATGAATTAGAGGACTCTACATTCCCTGCCACTCCTGTTGTGCAGCTGGGTACTGGTACTAGAATGAGTGCTCGACTTCGTCATGTCCAACCAGAGGTTAACGTGGATCAGAGTTATGAAGCATTGAAGCGAAGTAAGAAGATCACCGAATTGCATGCAGCAGAAGACAAGGCACTAGATTCTGTACCGCCAAAGTCTTCTCAGGAGCATCAACCTAATGACACAAATTCTAAAAGGCTCGAACCTATGTCAATTGAAGGAAACTTGCACGGAACTTGTACAAATGACCTTGCTGATAGCAACAGTCCCGAGGATGTCACAGTGCTAGATGGTGAATTTTCAAGAGAAGTGGAGTCTCTCGAGCAACTTTTTGTGAAGCGTAGTGAAAATTTCAGCATTCCACAACTTGAAAGGCTTTACACGAGAATTATGAAGGGCGTGTTTGAAACCAAAAATAAAGGAGTGAATGGGGATCTTAAGTCTTCGTTTTTGAAGTTTTTGTTGAATTTTGTAGAGGACGATGCAAATTTCTAA 3597 0.4317 MYPKRSDQDGPDLRQVRSSDRIKTRPNIYGRPYLFYNQNLRRTRKNKNKTRTAASQIAKMLRPGNRKSQDSNTNSGSANLRRSTRKRRLNVNLEDFTDSSGAEDEDLMRPTYPSLRNRIKNRVKQDGLMSSKRKRVAETKQTPRREGLRPRRSKGAVKERLISESDDEQDLSEEKVDQDETENGNDVEENDADDVQNEIEGDAEGEDEGEDEGDEDGDDEEGEEEQDGRRRYDLRNRSDVRRFSMEERKVRPRSPRRVLHQGMGTKVSRDVRKGGSRVHKRHRLARPEDSDDSLLVDELDQGPAVSWGRGGNRSGPPWLFGGLDMHGTTAFGLNLAASGWGHQGDALATLTSGIQTAGPSSKGGADIQPLQVDDSVGFDDIGGLSEYIDALKEMVFFPLLYPDFFASYHITPPRGVLLCGPPGTGKTLIARALACAASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQRNQPSIIFFDEIDGLAPVRSSKQEQIHNSIVSTLLALMDGLDSRGQVVLIGATNRIDAIDGALRRPGRFDREFNFPLPGCEARAEILDIHTRKWKHPPTNELKKELAASCVGYCGADLKALCTEAAIHAFRQKYPQVYTSDDKFVIDVDSVKVEKTHFIEAMSTITPAAHRGAIVHSRPLSLVVQPCLQRHLEKAMSVISDIFPPASIASELTKLSMLSYGSAIPLVYRPRLLLCGGEGTGLDHLGPAVLHELEKFPVHSLGLPSLLSDPSAKTPEEALVHIFGEARRTTPSILYLPQFDVWWETAHEQLRAVLLTLLEELPSDLPILVLGTSSVALAEVEEVPTSVFPHRAIYQVNMPCAKDRTLFFNLLIEAAMSILLEGIKKSQDTGYIPELPKAPKLASGPKVSELKAKVESEQHALRRLRMCLRDICNRILYDKRFNAFHYPVSDEDAPNYRSIIQNPIDMATILQHVDNGQYITCAAFMQDINLIVSNAKAYNGEDYNGARIVSRACELRDAVHGMLSQMDPALIAYCDKIASQGGPVQLSDELEDSTFPATPVVQLGTGTRMSARLRHVQPEVNVDQSYEALKRSKKITELHAAEDKALDSVPPKSSQEHQPNDTNSKRLEPMSIEGNLHGTCTNDLADSNSPEDVTVLDGEFSREVESLEQLFVKRSENFSIPQLERLYTRIMKGVFETKNKGVNGDLKSSFLKFLLNFVEDDANF* 1199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu11g00666 1198 CDD Bromo_AAA 895 1005 - -
Lapu11g00666 1198 Gene3D - 374 644 IPR027417 -
Lapu11g00666 1198 MobiDBLite consensus disorder prediction 1085 1102 - -
Lapu11g00666 1198 FunFam ATPase family AAA domain-containing protein 887 1015 - -
Lapu11g00666 1198 MobiDBLite consensus disorder prediction 166 223 - -
Lapu11g00666 1198 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 700 912 IPR027417 -
Lapu11g00666 1198 MobiDBLite consensus disorder prediction 119 165 - -
Lapu11g00666 1198 Gene3D - 689 816 IPR027417 -
Lapu11g00666 1198 FunFam ATPase family AAA domain-containing protein 2B 552 637 - -
Lapu11g00666 1198 PRINTS Bromodomain signature 927 943 IPR001487 GO:0005515
Lapu11g00666 1198 PRINTS Bromodomain signature 943 961 IPR001487 GO:0005515
Lapu11g00666 1198 PRINTS Bromodomain signature 961 980 IPR001487 GO:0005515
Lapu11g00666 1198 FunFam ATPase family, AAA domain-containing 2 374 557 - -
Lapu11g00666 1198 MobiDBLite consensus disorder prediction 1077 1102 - -
Lapu11g00666 1198 SUPERFAMILY Bromodomain 893 1006 IPR036427 GO:0005515
Lapu11g00666 1198 Pfam ATPase family associated with various cellular activities (AAA) 416 551 IPR003959 GO:0005524|GO:0016887
Lapu11g00666 1198 SMART bromo_6 895 1002 IPR001487 GO:0005515
Lapu11g00666 1198 Pfam Bromodomain 905 976 IPR001487 GO:0005515
Lapu11g00666 1198 Pfam AAA+ lid domain 578 615 IPR041569 -
Lapu11g00666 1198 Gene3D - 552 637 - -
Lapu11g00666 1198 MobiDBLite consensus disorder prediction 1 21 - -
Lapu11g00666 1198 MobiDBLite consensus disorder prediction 65 80 - -
Lapu11g00666 1198 MobiDBLite consensus disorder prediction 62 235 - -
Lapu11g00666 1198 ProSitePatterns AAA-protein family signature. 521 539 IPR003960 GO:0005524|GO:0016887
Lapu11g00666 1198 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 376 641 IPR027417 -
Lapu11g00666 1198 PANTHER AAA DOMAIN-CONTAINING 43 1012 IPR045199 -
Lapu11g00666 1198 SMART AAA_5 412 553 IPR003593 GO:0016887
Lapu11g00666 1198 Gene3D - 887 1015 IPR036427 GO:0005515
Lapu11g00666 1198 ProSiteProfiles Bromodomain profile. 918 980 IPR001487 GO:0005515
Lapu11g00666 1198 MobiDBLite consensus disorder prediction 1 25 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu11g00666 Lapu-Chr11 9799200 9807214 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu11g00666 362 616 Calmodulin-binding Proteins AT3G56690 37.452 1.98e-42 167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu11g00666 K22531 - gmx:100787765 2131.68