Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu11g00636 ATGGACCATGACAAGACTGGGTGCCAAGCTCCTCCTGAAGGTCCTATATTGTGCATCAACAACTGTGGTTTTTTTGGAAGTGCAGCTACCATGAATATGTGTTCTAAATGCCACAAAGACATGTTGCTGAAACAGGAGCAGGCCAAGCTTGCAGCATCGTCCATTGGGAATATTATGAATGGGTCATCTAGCAGCACTGAAAGTGAACCTGTTGTTGCTGCCAATGTTGATATCCCAGTTATTTCAGTAGAGCCTAAAACTGTCTCTGTGCAACCTTTATTTGGTTCAGTTTCAGAGGGGAGTGAGGAGGTAAAGCCGAAGGATGGTCCAAAACGTTGCAGCAGCTGCAATAAGCGAGTTGGTTTGACAGGGTTTAATTGTCGATGTGGCAACCTTTTTTGTGCTGTACATCGCTACTCAGACAAGCATAATTGCCCGTTTGATTACCGCACTGCTGCCCGGGATGCCATAGCTAAAGCAAACCCAGTTGTCAAGGCTGAGAAGCTGGATAAGATTTAA 519 0.4547 MDHDKTGCQAPPEGPILCINNCGFFGSAATMNMCSKCHKDMLLKQEQAKLAASSIGNIMNGSSSSTESEPVVAANVDIPVISVEPKTVSVQPLFGSVSEGSEEVKPKDGPKRCSSCNKRVGLTGFNCRCGNLFCAVHRYSDKHNCPFDYRTAARDAIAKANPVVKAEKLDKI* 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu11g00636 172 SUPERFAMILY AN1-like Zinc finger 99 167 IPR035896 -
Lapu11g00636 172 ProSiteProfiles Zinc finger AN1-type profile. 107 153 IPR000058 GO:0008270
Lapu11g00636 172 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 17 53 - -
Lapu11g00636 172 SMART A20_3 15 39 IPR002653 GO:0003677|GO:0008270
Lapu11g00636 172 Pfam AN1-like Zinc finger 113 149 IPR000058 GO:0008270
Lapu11g00636 172 Gene3D - 95 168 IPR035896 -
Lapu11g00636 172 SMART AN1_Zf_4 113 150 IPR000058 GO:0008270
Lapu11g00636 172 Pfam A20-like zinc finger 16 39 IPR002653 GO:0003677|GO:0008270
Lapu11g00636 172 ProSiteProfiles Zinc finger A20-type profile. 12 46 IPR002653 GO:0003677|GO:0008270
Lapu11g00636 172 PANTHER AN1-TYPE ZINC FINGER PROTEIN 13 172 - -
Lapu11g00636 172 Gene3D - 4 70 - -
Lapu11g00636 172 FunFam Zinc finger AN1-type containing 6 87 168 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu11g00636 Lapu-Chr11 9520110 9520655 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu11g00636 8 172 C2H2 Transcription Factor Family AT3G52800 43.636 9.58e-39 128
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu11g00636 - - gmx:100499857 332.798
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu11g00636 11 9520110 9520655 Lapu11g00636 11 9520110 9520655 ECH
Lapu7g00227 7 2559496 2562094 Lapu11g00636 11 9520110 9520655 ECH