Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu11g00620 ATGGCCTCTGTAGCACTCACCACCGCCACGACCACCGCCACGCTCCCCTCTCTACGCCTCCGCCGCTGCACCACCGCCGCCCTCAAACCCAATCGTCTCACTTCCCTTCCACCTTCCTCACTCAAAACAAACCTCACCACTTCGATTTCCTCCTTCCCAAATTTCTCACTAAAAAAATCAAACTTCGTTTTCAATCGCAAGCACTCTTCTCTCACTGTTAGAGCTACCGCAGCTTCCATCACTCCGGCTCCGGCTCCGGCACCGGCGCCGGTTCAGCCATGGCAAGGCGCCGCAATAAAACCCCTATTAGCCTCCATCGCCACGGGAGTGATCCTCTGGTTCACACCAGTTCCCGCGGGTGTGAACCGTAACGCGTGGCAATTACTCGCGATCTTCTTGGGCACAATCGTCGGCATTATAACCCAACCGTTGCCCCTCGGCGCGGTAGCGATATTAGGTTTGGGCGTTTCCGTTCTCACCAAAACCCTAACGTTCGCCGCCGCGTTCTCCGGCTTCGGTGACCCGATCCCCTGGCTTATCGCGCTCGCATTCTTCTTCGCCAAGGGATTCATCAAAACTGGCCTCGGGAACCGTGTTGCGTACCAGTTCGTGAAGCTCTTCGGCAGCTCCTCGCTCGGGTTAGGATACAGCCTCGTCTTCAGCGAGGCGCTGCTGGCGCCGGCGATTCCCTCGGTGTCGGCGAGGGCGGGCGGGATTTTCCTCCCTCTCGTGAAGGCGCTGTGCGTGGCGTGCGGGAGCAACGCCGGCGACGGGACGGAGAACAGGTTGGGCGCGTGGCTCATGCTCACGTGCTTTCAGACTTCGGTGATTACGTCGGCGATGTTTCTGACGGCGATGGCGGCGAACCCGCTTTGCGCGACACTGACGCAGAATTCCATTAACCAGACGATTGGGTGGTTGGATTGGGCCAAAGCTGCAATTGTCCCTGGCTTGGTGTCGTTGGTGTTGGTTCCGTTGATTTTGTATGTTATATACCCTCCGACTCTGAAGAGTAGTCCTGATGCTCCTAAGCTTGCGAGAGAGAAGTTGGAGAAGATGGGGCCCATGACAACCAATGAGAAGATAATGACTGCTACTCTGTTTCTCACGGTGGGACTTTGGGTATTTGGAGGAATTCTTAATATTGATGCTGTATCTGCTGCAATTCTTGGATTATCTGTACTTCTTGTCACAGGGGTTGTTACATGGAAGGAGTGCTTAGCTGAAGGAGTTGCCTGGGATACTCTCACATGGTTTGCTGCCCTCATAGCAATGGCTGGGTATTTGAACAAATATGGCCTCATTTCTTGGTTCAGTCAAACTGTAGTCAAGTTTGTTGGTGGATTGGGTCTATCATGGCAATTATCCTTTGGGATTCTAGTCCTTCTCTACTTTTATTCTCATTACTTCTTTGCAAGTGGAGCTGCTCATATTGGTGCCATGTTTACTGCATTTTTGTCTGTTTCCACTGCTCTGGGGACTCCACCATTCTTTGGAGCCATAGTACTATCGTTCCTCTCCAACCTTATGGGTGGTCTTACTCATTATGGAATTGGATCAGCTCCCGTGTTTTTCGGTGCTAACTACGTACCCCTTGCTAAATGGTGGGGTTATGGATTCCTCATTAGTATTGTTAACATTATCATCTGGCTTGGACTCGGAGGAGTTTGGTGGAAATTCATTGGCTTGTGGTGA 1695 0.5239 MASVALTTATTTATLPSLRLRRCTTAALKPNRLTSLPPSSLKTNLTTSISSFPNFSLKKSNFVFNRKHSSLTVRATAASITPAPAPAPAPVQPWQGAAIKPLLASIATGVILWFTPVPAGVNRNAWQLLAIFLGTIVGIITQPLPLGAVAILGLGVSVLTKTLTFAAAFSGFGDPIPWLIALAFFFAKGFIKTGLGNRVAYQFVKLFGSSSLGLGYSLVFSEALLAPAIPSVSARAGGIFLPLVKALCVACGSNAGDGTENRLGAWLMLTCFQTSVITSAMFLTAMAANPLCATLTQNSINQTIGWLDWAKAAIVPGLVSLVLVPLILYVIYPPTLKSSPDAPKLAREKLEKMGPMTTNEKIMTATLFLTVGLWVFGGILNIDAVSAAILGLSVLLVTGVVTWKECLAEGVAWDTLTWFAALIAMAGYLNKYGLISWFSQTVVKFVGGLGLSWQLSFGILVLLYFYSHYFFASGAAHIGAMFTAFLSVSTALGTPPFFGAIVLSFLSNLMGGLTHYGIGSAPVFFGANYVPLAKWWGYGFLISIVNIIIWLGLGGVWWKFIGLW* 565
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu11g00620 564 CDD ArsB_NhaD_permease 136 558 - -
Lapu11g00620 564 Pfam Sodium:sulfate symporter transmembrane region 101 564 IPR001898 GO:0016020|GO:0022857|GO:0055085
Lapu11g00620 564 NCBIfam DASS family sodium-coupled anion symporter 116 558 IPR001898 GO:0016020|GO:0022857|GO:0055085
Lapu11g00620 564 PANTHER DICARBOXYLATE TRANSPORTER 2.1, CHLOROPLASTIC 66 564 IPR030676 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu11g00620 Lapu-Chr11 9365886 9370554 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu11g00620 23 563 Antiporters AT5G12860 81.387 0.0 858
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu11g00620 - - gmx:100796365 986.482
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu11g00620 11 9365886 9370554 Lapu11g00620 11 9365886 9370554 ECH