Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu11g00609 ATGGAAAACAGGAAAGATCCTATCTTGGTGGAAGGAAGGATGATGCAGGAAATTGAGATACCCATTACCTCTGAAAGACTTGATGTTCTCCCCTCGAAGGCAGAGTCATCTTGCTGTTCTGGTTGCCCCTTTTCTGGACATGAAAATAGTGTTGTGACATCAATGGAGTCTTCAAAGTCAGCAAAGAAACTTTCTGGACTCATTATTTTCTATGCTATTGTCATGGTTGTGGAACTTATTGGTGGAGTAAAAGCTCACAGCCTAGCTGTCATCAGTGACGCAGCACACTTACTTTCTGATATTACTGGATTCTCTATCTCTCTCTTTGCAGTATGGGCTTCAGGTTGGGAGGCAACACCACATCAATCTTTTGGATACAATCGTCTCGAGGTTTTGGGGGCTCTTATATCTGTGCAGTTAATTTGGTTGATATCTGGTTTTTTGATATATGAAGCAGTTGGTAGAATTCTTCTAAGAAACGCCAGTGTGAATGGAAAGCTCATGCTTGCAATTGCAACACTTGGGTTTGTTCTTAACTTTATCATGGTTGCATGGATTGGTCATGATCATGGTCATCATCATCATGGTCATGGTCATCATCATCATCATCATCATGATGCTTGTCAAGACTTTGGCCATGATCATAGTCATCCTCAATGTGAGACAGATCATGATCATGATCACGGGAATGAGGAACTATCTCTAGTACCTGATGAGGAGAATGTTACCTTGGTTTCAAGTAATCACAGAAATACTAATGTCTTGAACATAAATCTTCAGGGGGCGTATTTGCATGTCATGACTGATATGATTCAATCGGTTGGAGTGATGATTGCTGGAGCCATAATATGGGCTGAACCTGAGTGGTTTATAGTTGACCTTGTGTGTACTCTTATATTCTCTGTTTTATCTTTAAGTACTACCATGCCCATGCTTAGGAGTATTTATGGCATTCTGATGGAAAGGACACCGAGTGAGATAGATATTAGCAAGCTGGAGAGTAGCATTAGAAATATAAAGGGAGTGCAGGATGTTCACGACTTGCACGTTTGGGCTATAACTGTTGGAAAACTTGTTCTATCTTGCCATGTAGTGGCTGAGCCTGGCATAAGTTCCATTGATTTACTAGGCAGTATTAAACATTACTGTGAAAAAACATATCAAATACAGCATGTAACCATACAAATTGAGTAA 1194 0.402 MENRKDPILVEGRMMQEIEIPITSERLDVLPSKAESSCCSGCPFSGHENSVVTSMESSKSAKKLSGLIIFYAIVMVVELIGGVKAHSLAVISDAAHLLSDITGFSISLFAVWASGWEATPHQSFGYNRLEVLGALISVQLIWLISGFLIYEAVGRILLRNASVNGKLMLAIATLGFVLNFIMVAWIGHDHGHHHHGHGHHHHHHHDACQDFGHDHSHPQCETDHDHDHGNEELSLVPDEENVTLVSSNHRNTNVLNINLQGAYLHVMTDMIQSVGVMIAGAIIWAEPEWFIVDLVCTLIFSVLSLSTTMPMLRSIYGILMERTPSEIDISKLESSIRNIKGVQDVHDLHVWAITVGKLVLSCHVVAEPGISSIDLLGSIKHYCEKTYQIQHVTIQIE* 398
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu11g00609 397 SUPERFAMILY Cation efflux protein transmembrane domain-like 62 321 IPR027469 -
Lapu11g00609 397 PANTHER CATION EFFLUX PROTEIN/ ZINC TRANSPORTER 35 397 - -
Lapu11g00609 397 MobiDBLite consensus disorder prediction 205 232 - -
Lapu11g00609 397 Gene3D Cation efflux protein transmembrane domain 61 319 IPR027469 -
Lapu11g00609 397 NCBIfam cation diffusion facilitator family transporter 65 397 IPR002524 GO:0006812|GO:0008324|GO:0016020|GO:0055085
Lapu11g00609 397 Pfam Cation efflux family 68 320 IPR002524 GO:0006812|GO:0008324|GO:0016020|GO:0055085
Lapu11g00609 397 SUPERFAMILY Cation efflux protein cytoplasmic domain-like 324 397 IPR036837 -
Lapu11g00609 397 MobiDBLite consensus disorder prediction 195 232 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu11g00609 Lapu-Chr11 9302559 9304898 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu11g00609 16 397 Inorganic Solute Cotransporters AT2G29410 46.494 1.63e-113 335
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu11g00609 K14689 - gmx:100777590 641.728
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu11g00609 11 9302559 9304898 Lapu11g00609 11 9302559 9304898 ECH