Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu11g00595 ATGGGGGAAGAGGTGAAGACCAGCGAGTACGACGAAGAGCGCGTCATGGACTGGGAGGTCGGTCTCCCCACCGCCAACGATCTCACGCCTCTCTCCCAGCCGCTGATTCCGCCGGAGCTCGCCACCGCCTTCAGCATATCGCCGGAGCCCTTTCGCACCGCCCTCGATGTCAACCGCGCCTCGCGCAACACGCTCTCCACGCTTCGCGGCGGCGGGAGCGTGCACCAGGCCTTCTCCTCCTCCAACAACCACCACCACGAGGAGGAGGACGAAGAGGTCGAGGATGAGGACACCGATCGCGATGGCTCGGGGTCGGATTCCCGGAAGCATCGGAAGATCGAGTGCGTGGCGGAGGAGGCGGACTCGGCGGTGCGGACGGAGAACTCGGCGGAGCGGACGGCGGTGAAGCGGCCGAGGCTGGTGTGGACCCCGCAGCTGCACAAGCGATTCGTGGACGTGGTGGCGCACCTTGGGATCAAGAACGCGGTGCCGAAGACGATTATGCAGTTGATGAACGTGGAAGGGTTGACCCGTGAGAATGTGGCGAGTCATCTTCAGAAGTATCGGCTTTACCTGAAGCGGATGCAGGGTCTCTCCAACGAAGGTCCTTCTTCGTCGGATCAATTATTCGCTTCCACACCTGTGCCTCAGAGTTTGCACGACTCTGCTCCTCCCAGTGCCCATTCCCATGGTCACTCCCATGGCCATGCCAATGCTCATCTCCCTGTTCCCATGATGTCCATGCCCTATCCCCCTCCCATGATGTCCATGCCTGTCCTCGGCATGCCCCATGCCCATGGCCACATGGGCATTCCCATGCCCACTTCTTCCGCCACCTCCGCTTACCATCCTTACAACATGCTGCATCAAAGGGATTGGACTCACCTTGCTCCTAGTGATAAATGA 906 0.6082 MGEEVKTSEYDEERVMDWEVGLPTANDLTPLSQPLIPPELATAFSISPEPFRTALDVNRASRNTLSTLRGGGSVHQAFSSSNNHHHEEEDEEVEDEDTDRDGSGSDSRKHRKIECVAEEADSAVRTENSAERTAVKRPRLVWTPQLHKRFVDVVAHLGIKNAVPKTIMQLMNVEGLTRENVASHLQKYRLYLKRMQGLSNEGPSSSDQLFASTPVPQSLHDSAPPSAHSHGHSHGHANAHLPVPMMSMPYPPPMMSMPVLGMPHAHGHMGIPMPTSSATSAYHPYNMLHQRDWTHLAPSDK* 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu11g00595 301 Gene3D - 133 196 - -
Lapu11g00595 301 NCBIfam myb-like DNA-binding domain, SHAQKYF class 138 190 IPR006447 GO:0003677
Lapu11g00595 301 SUPERFAMILY Homeodomain-like 135 194 IPR009057 -
Lapu11g00595 301 MobiDBLite consensus disorder prediction 198 240 - -
Lapu11g00595 301 MobiDBLite consensus disorder prediction 198 224 - -
Lapu11g00595 301 PANTHER HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN-RELATED 13 270 IPR044841 GO:0003700|GO:0006355
Lapu11g00595 301 Pfam Myb-like DNA-binding domain 141 189 IPR001005 -
Lapu11g00595 301 FunFam Two-component response regulator 133 196 - -
Lapu11g00595 301 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 134 193 IPR017930 -
Lapu11g00595 301 MobiDBLite consensus disorder prediction 66 80 - -
Lapu11g00595 301 MobiDBLite consensus disorder prediction 66 112 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu11g00595 Lapu-Chr11 9240742 9243117 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu11g00595 1 221 G2-like Transcription Factor Family AT3G46640 62.140 1.24e-86 261
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Lapu11g00595 Myb_DNA-binding 1.2e-08 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu11g00595 - - aprc:113858844 468.388
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu11g00595 11 9240742 9243117 Lapu11g00595 11 9240742 9243117 ECH