Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu11g00592 ATGAGGTTTGTCTTCCGAGGGAGTAGGGGAGATATTGAAAGTGGCTTTTCAGAATATGTTCCTGAAAGAACCTTGATGCGGGTTCATCCAGCTCGGCCGGTTAATGGCAATTCTCTAGCTTTTCTTATCACAGTTATTTTGATATTCATGATATTAAACTCCCCTCAGATGTTACATAATTTTTTGCTCTGGGTTGTACTGGCTATCTTTGTGATGGCTACAAGTCTGAGGATGTATGCAACTTGTCAACAGCTTCAAGCACAGGCTAGGGCTCATGCTGCAGCAGCCTCTGGGTTGCTTGGCCATACTGAACTCCGTCTTCACATGCCACCATCGATTGCAATTGCAACCAGAGGAAGATTGCAGGGACTTAGACTTCAGCTTGCACTTCTTGACCGTGAATTTGATGAGCTAGATTATGATACTTTGAGAGCTCTGGACACTGATACTGCTACTAGTACTCGTTCAATGACTGAGGAAGAGATAAATGCCTTGCCTATTCACACTTATAAAGTTCCAGTCCCACCAAAAGATGGCTCCGCTGGTTTGGCGTCCTCTTCAGGTGCAGCTGAGATTAAACAAGAATCTGGAGGAACAGAGGCAGGTATCAGAGTTCCAGAAGATGAGCTGACATGTACTATATGCTTGGACCAAGTTAAGAGGGGGGAGCTTGTTCGTAGCTTACCATGCTTGCATCAGTTTCATGCCAACTGCATTGATCCATGGCTCCGGCAACAAGGAACATGTCCTGTGTGCAAATTAAGGATTGGGTCGGGAAGTGCGGGAAACAGGGAGAGCGACTCCGATGGTTCAGATATTGCGTAA 825 0.4582 MRFVFRGSRGDIESGFSEYVPERTLMRVHPARPVNGNSLAFLITVILIFMILNSPQMLHNFLLWVVLAIFVMATSLRMYATCQQLQAQARAHAAAASGLLGHTELRLHMPPSIAIATRGRLQGLRLQLALLDREFDELDYDTLRALDTDTATSTRSMTEEEINALPIHTYKVPVPPKDGSAGLASSSGAAEIKQESGGTEAGIRVPEDELTCTICLDQVKRGELVRSLPCLHQFHANCIDPWLRQQGTCPVCKLRIGSGSAGNRESDSDGSDIA* 275
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu11g00592 274 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 193 259 IPR013083 -
Lapu11g00592 274 CDD RING-H2_PA-TM-RING 211 253 - -
Lapu11g00592 274 SMART ring_2 212 252 IPR001841 -
Lapu11g00592 274 ProSiteProfiles Zinc finger RING-type profile. 212 253 IPR001841 -
Lapu11g00592 274 MobiDBLite consensus disorder prediction 176 202 - -
Lapu11g00592 274 SUPERFAMILY RING/U-box 207 257 - -
Lapu11g00592 274 Pfam Ring finger domain 211 253 IPR001841 -
Lapu11g00592 274 PANTHER TARGET OF ERK KINASE MPK-1 1 258 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu11g00592 Lapu-Chr11 9195605 9200710 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu11g00592 1 274 C3H Transcription Factor Family AT3G55530 68.953 4.91e-125 355
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu11g00592 K16283 - gmx:100805406 460.299