Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu11g00587 ATGCTCTCCATGGATTCCCTTTTGGATACTTTTCCTGGTTCTGTAAATGGATTCATATTTGAAAACGGTTCTGTCTCGTTGTTTACGAATCAGAACAGGGTAAGTGAGTTCAAGTTGGATGATTCACCTGTCTCGGTGTTTACGAATCAGAACCGGGCATGTGAGTTCAAGTTGGATGATTCACGTTCCCCTTCGGAATCTGCTACTGATTCTGCTCCCTCTTCTGGGACAAGCTCTGACGGAGAACACGCAGAGAGTACTAAACACTTCAATCCCATTCTCAGGTACATTAGTGATATCCTCATGGAGGAAGAGGATGATTTGGAGCGCAAACCCTGCATGTTGCAGGATTGTTTGAGACTCCAGGCTGCTGAAAAATCATTCTATGATGCTTTGGTTCATAGTCACCCATCATCACCTCATCAATTTAATGATAACCCAGACCCAGATGATAATTTTGGTGGAACCACTAGTTCTGAGAGTTATAGCAGTTATACCACTGACAATTCATGTGAGTCTGATTGGTTTAACGGTGCTGGTGATTTTGAGTCTGCTTTCCTACAAAGATCGCTGCATAATTCTCCGGAACATGCTTATGTTGCTCCTGATCTGATTAGAGAGGCACAAGGTGGGTTCCATTTTTCAAATGGAGCTTGGAATTTGATTCACTCTCAGAACAAGCCGGTCGTGATTGAAGAGAGTGTGACGAGGACAGGCACAGGATCAAGGGAGAAGAGGAGCCATCTCATGAAAGATGATGTCTCACATGAAGAAGAGGAGAGAAGCAATAAGCTTTCAGCTGTCTACTCTGATGATTCGGAGCCATCTAGCATGTTCGATGAAGTGCTGCTTTGCAAGGATGGCAAGAGTCCAGCCATTTTTAAGTCTGACCGTGAACCGTCATCTTCACAGATTGCTGATTCAGGAGGATCTAATGGAAAGACAACACGTTCGAAGAAAGGTTCTAACAAGGGAAAAAGTGCAAGAACAACGGTGGATTTATGGACTTTGCTATCTCAATGCGCACAAGCTGTGGCTAGCTTTGACCCAAGGACTGCAAATGAAATACTCAAGCAGATTAGGCAGCACTCTTCACCTTTAGGCGATGGACTTCAGCGTTTGGCTCACTACTTTGCCGATGGCCTGGAGACCAGGTTAGCTGCTGGGACACCAAAGTTCATGCTCTTTCAGTCAGCATCTGCTGCAGATATGTTAAAAGCTTACAGAGTGTATGTCACAGCATCACCATTTCACTGGATGTCAAATTTCTTGGCTAACCGTACTATTCTGAAGTTAGCACAAAGTGAAAGCAGTCTTCACATTATTGACTTTGGGATTAGCTACGGTTTCCAGTGGCCTTGCCTAATCCAACGGCTTTCAGAGAGGGCAGGCGGTCCTCCAAGGCTTCGTATAACAGGAATCGATCTTCCTCAGCCAGGATTTAGGCCAGCAGAAAGGGTAGAGGAGACGGGGCGGCGCCTAGAGAAGTACTGCAAGAGGTTTGGAGTCCCGTTTGAGTACAATTGCCTTGCTCAGAAATGGGAAACTATAAGAATTGAGGACCTCAAACTTGATAGGAGTGAAGTAACTGTGGTTAACTGTTTGTACAGATTGAAGAACCTGTCTGATGAAACTGTGACTGCGAACTGTCCAAGAGATGCTGTGCTGAGGTTGATCAGGAGGATCAATCCAACCATCTTCATGCATGGTGTTGTCAATGGCACCTACAATGCACCATTCTTCCTGACAAGGTTCAGGGAAGCACTCTTCCACTTCTCAGCATTGTTTGATATGTTTGAAGCTAATGTGCCTCGGGAAGATCCATCTAGGCTTATGTTTGAGAAAGGGTTGTTTGGAAGGGACGCAATCAATGTCATAGCATGTGAGGGCGCAGAGAGGGTTGAGAGGCCAGAGACCTACAAGCAGTGGCAGGTCAGGAACCAGAGAGCAAGGTTCAAGCAACTTCCATTGGCCACAGAGCTCGTGAACAGAGTAAAGGAAATGGTGAAAAAGGAATATCATAAAGATTTTACAGTCGATGAGGATGGCAAGTGGGTTTTGCAAGGATGGAAAGGGCGTATTCTATTTGCTCTTTCTTCTTGGGTTCCTGCTTGA 2115 0.4534 MLSMDSLLDTFPGSVNGFIFENGSVSLFTNQNRVSEFKLDDSPVSVFTNQNRACEFKLDDSRSPSESATDSAPSSGTSSDGEHAESTKHFNPILRYISDILMEEEDDLERKPCMLQDCLRLQAAEKSFYDALVHSHPSSPHQFNDNPDPDDNFGGTTSSESYSSYTTDNSCESDWFNGAGDFESAFLQRSLHNSPEHAYVAPDLIREAQGGFHFSNGAWNLIHSQNKPVVIEESVTRTGTGSREKRSHLMKDDVSHEEEERSNKLSAVYSDDSEPSSMFDEVLLCKDGKSPAIFKSDREPSSSQIADSGGSNGKTTRSKKGSNKGKSARTTVDLWTLLSQCAQAVASFDPRTANEILKQIRQHSSPLGDGLQRLAHYFADGLETRLAAGTPKFMLFQSASAADMLKAYRVYVTASPFHWMSNFLANRTILKLAQSESSLHIIDFGISYGFQWPCLIQRLSERAGGPPRLRITGIDLPQPGFRPAERVEETGRRLEKYCKRFGVPFEYNCLAQKWETIRIEDLKLDRSEVTVVNCLYRLKNLSDETVTANCPRDAVLRLIRRINPTIFMHGVVNGTYNAPFFLTRFREALFHFSALFDMFEANVPREDPSRLMFEKGLFGRDAINVIACEGAERVERPETYKQWQVRNQRARFKQLPLATELVNRVKEMVKKEYHKDFTVDEDGKWVLQGWKGRILFALSSWVPA* 705
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu11g00587 704 MobiDBLite consensus disorder prediction 137 164 - -
Lapu11g00587 704 MobiDBLite consensus disorder prediction 65 81 - -
Lapu11g00587 704 MobiDBLite consensus disorder prediction 293 327 - -
Lapu11g00587 704 ProSiteProfiles GRAS family profile. 325 702 IPR005202 -
Lapu11g00587 704 MobiDBLite consensus disorder prediction 135 164 - -
Lapu11g00587 704 MobiDBLite consensus disorder prediction 234 274 - -
Lapu11g00587 704 MobiDBLite consensus disorder prediction 238 267 - -
Lapu11g00587 704 MobiDBLite consensus disorder prediction 57 86 - -
Lapu11g00587 704 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 263 696 IPR005202 -
Lapu11g00587 704 MobiDBLite consensus disorder prediction 296 318 - -
Lapu11g00587 704 Pfam GRAS domain family 336 701 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu11g00587 Lapu-Chr11 9161816 9164628 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu11g00587 245 704 GRAS Transcription Factor Family AT1G07530 56.531 0.0 537
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Lapu11g00587 GRAS 1.7e-112 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu11g00587 - - gmx:100815586 1155.58